Gene CPF_0549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0549 
SymbolribH 
ID4200968 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand+ 
Start bp655201 
End bp655662 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content34% 
IMG OID638081431 
Product6,7-dimethyl-8-ribityllumazine synthase 
Protein accessionYP_695003 
Protein GI110799137 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0054] Riboflavin synthase beta-chain 
TIGRFAM ID[TIGR00114] 6,7-dimethyl-8-ribityllumazine synthase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.743213 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGATTT TAGAAGGAAA TTTAATAGGT CAAGATAAAA AGTTTGCTAT AGTTGCAGGA 
AGATTTAATG AATTCATTGT ATCAAAGCTT ATAGATGGAG CTTTAGATGC TTTTAAAAGA 
CATGGAGTAG AGGAAGATAA TATAGACCTT GCTTGGGTTC CAGGAGCTTT TGAAATACCA 
TTAATAGCTA AAAAGTTAGC TAAGTCAGGA AAATATGCTG GAGTTGTTTG TTTAGGAACA 
GTAATAAGAG GAGCTACTAG TCATTATGAT TATGTTTGTG GAGAGGTATC AAAAGGAATA 
GCTAATGTAA GCTTAGATAC TGAAGTACCA GTTATCTTTG GAATAGTAAC AACTGAGAAT 
ATAGAACAAG CTATAGAAAG AGCCGGAACT AAAGCTGGGA ATAAAGGGTT TGATGCAGCT 
ATGGCAGCCA TTGAAATGGC AAATCTTTTA GAGAATATAT AA
 
Protein sequence
MRILEGNLIG QDKKFAIVAG RFNEFIVSKL IDGALDAFKR HGVEEDNIDL AWVPGAFEIP 
LIAKKLAKSG KYAGVVCLGT VIRGATSHYD YVCGEVSKGI ANVSLDTEVP VIFGIVTTEN 
IEQAIERAGT KAGNKGFDAA MAAIEMANLL ENI