Gene CPF_0518 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0518 
Symbol 
ID4202097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp615878 
End bp616993 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content26% 
IMG OID638081400 
ProductNAD-dependent 4-hydroxybutyrate dehydrogenase 
Protein accessionYP_694972 
Protein GI110800333 
COG category[C] Energy production and conversion 
COG ID[COG1454] Alcohol dehydrogenase, class IV 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.024441 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTTT TAAGTTTAAA TACGGAAATA CTAGGTTTTG ATACTTCTTC TGAATTTGCA 
AAAGAATTAA ATTTAAATGA AAAAGACCTA GTTTTTACAA ACAGAAGAAT ATATGAAGGA
AGTTTTAAAT CTTTAGATTT AAAATGTAAT TATGTCTTAA AGGACAAATA TAATTTCAAT
GAACCTAATG ATGAAATTAT AGATGAAATT TTTAAAGATA TAAAAAATAT AGATTTTAAT
AGAGTTATAG CTATTGGTGG AGGATCAATT CTAGATGTAG GTAAACTTTT AGCTTTAAAA
GATGTAGATA GTACAAAGAA ACTATTTAAA AGAGAACTTC CTATAATAAG AGATAAGGAG
CTTATTATAG TTCCTACAAC TTGTGGTACT GGTAGTGAGG TAACAAACAT ATCTATTGTG
GAAATAAAGA GTGAAAATAC TAAGTTAGGT TTAGCAGTAG ATGAACTTTA TGCAGATAAA
GGAGTTTTAA TTCCTGAACT TTGTAAAACA ATGCCTTATA AAGCTTTTGT TTATAGTTCT
ATTGATGCAT TAATACATAG TATAGAAGGA TTTTTATCTC CAAACTCTAC TCCTTACACA
GATTTATTTG CTTTTAAAGC AATTGAAATG ATTTTAAGTG GATATAAAGA GATAATAGAA
AAAGGTGAAG AGTATAGAAA TACTATAATG GATAAATTTT TAATTGCAAG CAATTATGCA
GGAATAGCCT TTGGAAATGC AGGAGTTGGT GCAGTTCATG CCTTATCTTA TCCTTTAGGA
GGAAAATATC ATGTTCCTCA TGGAGAGGCA AATTATCAAT TTTTAATGGC AGTATTAAAT
TTCTACAAGA AAAACAATGG TGATGGAAAA ATTAGCGAAT TAACAAAATT AATAAGCAGT
ATTATAAATG CAAAGGAAGA GGATTGTTAT TTAGAGTTAG AAAACTTATT AAATAATCTT
ATTAGAAGAA AAAATTTAAA AGAATATGGT ATGACAATTG ATGAAATTGA AAAATTTTCT
CATAGTGTAA TGAAAAATCA ACAAAGATTA CTTAAAAATA ATTATGTATC TATGGAAATA
AAAGATATGG AGGAAATTTA TAAATCTCTA TATTAG
 
Protein sequence
MKLLSLNTEI LGFDTSSEFA KELNLNEKDL VFTNRRIYEG SFKSLDLKCN YVLKDKYNFN 
EPNDEIIDEI FKDIKNIDFN RVIAIGGGSI LDVGKLLALK DVDSTKKLFK RELPIIRDKE
LIIVPTTCGT GSEVTNISIV EIKSENTKLG LAVDELYADK GVLIPELCKT MPYKAFVYSS
IDALIHSIEG FLSPNSTPYT DLFAFKAIEM ILSGYKEIIE KGEEYRNTIM DKFLIASNYA
GIAFGNAGVG AVHALSYPLG GKYHVPHGEA NYQFLMAVLN FYKKNNGDGK ISELTKLISS
IINAKEEDCY LELENLLNNL IRRKNLKEYG MTIDEIEKFS HSVMKNQQRL LKNNYVSMEI
KDMEEIYKSL Y