Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_0518 |
Symbol | |
ID | 4202097 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 615878 |
End bp | 616993 |
Gene Length | 1116 bp |
Protein Length | 371 aa |
Translation table | 11 |
GC content | 26% |
IMG OID | 638081400 |
Product | NAD-dependent 4-hydroxybutyrate dehydrogenase |
Protein accession | YP_694972 |
Protein GI | 110800333 |
COG category | [C] Energy production and conversion |
COG ID | [COG1454] Alcohol dehydrogenase, class IV |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.024441 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACTTT TAAGTTTAAA TACGGAAATA CTAGGTTTTG ATACTTCTTC TGAATTTGCA AAAGAATTAA ATTTAAATGA AAAAGACCTA GTTTTTACAA ACAGAAGAAT ATATGAAGGA AGTTTTAAAT CTTTAGATTT AAAATGTAAT TATGTCTTAA AGGACAAATA TAATTTCAAT GAACCTAATG ATGAAATTAT AGATGAAATT TTTAAAGATA TAAAAAATAT AGATTTTAAT AGAGTTATAG CTATTGGTGG AGGATCAATT CTAGATGTAG GTAAACTTTT AGCTTTAAAA GATGTAGATA GTACAAAGAA ACTATTTAAA AGAGAACTTC CTATAATAAG AGATAAGGAG CTTATTATAG TTCCTACAAC TTGTGGTACT GGTAGTGAGG TAACAAACAT ATCTATTGTG GAAATAAAGA GTGAAAATAC TAAGTTAGGT TTAGCAGTAG ATGAACTTTA TGCAGATAAA GGAGTTTTAA TTCCTGAACT TTGTAAAACA ATGCCTTATA AAGCTTTTGT TTATAGTTCT ATTGATGCAT TAATACATAG TATAGAAGGA TTTTTATCTC CAAACTCTAC TCCTTACACA GATTTATTTG CTTTTAAAGC AATTGAAATG ATTTTAAGTG GATATAAAGA GATAATAGAA AAAGGTGAAG AGTATAGAAA TACTATAATG GATAAATTTT TAATTGCAAG CAATTATGCA GGAATAGCCT TTGGAAATGC AGGAGTTGGT GCAGTTCATG CCTTATCTTA TCCTTTAGGA GGAAAATATC ATGTTCCTCA TGGAGAGGCA AATTATCAAT TTTTAATGGC AGTATTAAAT TTCTACAAGA AAAACAATGG TGATGGAAAA ATTAGCGAAT TAACAAAATT AATAAGCAGT ATTATAAATG CAAAGGAAGA GGATTGTTAT TTAGAGTTAG AAAACTTATT AAATAATCTT ATTAGAAGAA AAAATTTAAA AGAATATGGT ATGACAATTG ATGAAATTGA AAAATTTTCT CATAGTGTAA TGAAAAATCA ACAAAGATTA CTTAAAAATA ATTATGTATC TATGGAAATA AAAGATATGG AGGAAATTTA TAAATCTCTA TATTAG
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Protein sequence | MKLLSLNTEI LGFDTSSEFA KELNLNEKDL VFTNRRIYEG SFKSLDLKCN YVLKDKYNFN EPNDEIIDEI FKDIKNIDFN RVIAIGGGSI LDVGKLLALK DVDSTKKLFK RELPIIRDKE LIIVPTTCGT GSEVTNISIV EIKSENTKLG LAVDELYADK GVLIPELCKT MPYKAFVYSS IDALIHSIEG FLSPNSTPYT DLFAFKAIEM ILSGYKEIIE KGEEYRNTIM DKFLIASNYA GIAFGNAGVG AVHALSYPLG GKYHVPHGEA NYQFLMAVLN FYKKNNGDGK ISELTKLISS IINAKEEDCY LELENLLNNL IRRKNLKEYG MTIDEIEKFS HSVMKNQQRL LKNNYVSMEI KDMEEIYKSL Y
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