Gene CPF_0488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0488 
Symbol 
ID4202710 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand+ 
Start bp579492 
End bp580121 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content27% 
IMG OID638081370 
Producthypothetical protein 
Protein accessionYP_694943 
Protein GI110798662 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0620779 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTATTA TTTCCCAAAA CACATTTTTA GTAGTAGGAA TTTTACTCTT TTGTTTATTT 
AGAGGAGCAA TTAAAATTAA AGGAATAATT AAGGAAGAAT ACATATATAA GCAAATATAT 
TCTAATGAAG AATTTATTTT TGATTTATTT TGTATTTACT TAATTGGAGT TGCCTCTAAG 
GTCTATTTTC CACTTACCAT AGCTTGGGGA AATAAGCTTG TTTATAATCC ACCAGAAGTT 
TGGCTTAGTC CTTTGTGGAG CATAAAGCAA ATATACCATC AAGGAGGATT GGGAGATGTT 
ATTTATCAGC TGATAGGGAA TTCAATTATG TTAAGTCCAA TGGCATTTTT TCTTTGCTAT 
TTTTATAGTA TAGATGAAGA AAAATTAACT TTAGGAAAAG GTATTATAGA TAAAATCAAT 
AAAATTTTAG AAAGCTTTGA ATTACATAAT AAAAAGAAGC TGAAAGAGGA TTTATATGTA 
CCTTCATTAA ATACAGTGTT GAAATTTTGC TTTTTTATGT CTTTATTCAT AGAGAGTTCC 
CAGGTTATAT TATCCTTAGT TTTTCCTAAT ACAAAAAGAT TTTTTGAAGT AAATGATCTT 
ATGTGTAATA CTTTAAGTGG AGTTTGGTGA
 
Protein sequence
MIIISQNTFL VVGILLFCLF RGAIKIKGII KEEYIYKQIY SNEEFIFDLF CIYLIGVASK 
VYFPLTIAWG NKLVYNPPEV WLSPLWSIKQ IYHQGGLGDV IYQLIGNSIM LSPMAFFLCY 
FYSIDEEKLT LGKGIIDKIN KILESFELHN KKKLKEDLYV PSLNTVLKFC FFMSLFIESS 
QVILSLVFPN TKRFFEVNDL MCNTLSGVW