| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_0455 |
|---|
| Symbol | |
|---|
| ID | 4203572 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens ATCC 13124 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008261 |
|---|
| Strand | - |
|---|
| Start bp | 540545 |
|---|
| End bp | 541330 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 23% |
|---|
| IMG OID | 638081339 |
|---|
| Product | MerR family transcriptional regulator |
|---|
| Protein accession | YP_694912 |
|---|
| Protein GI | 110800598 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0789] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00278493 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAAT ATTTTTCAAT TGGTGAAGTT TCAAAAATTA CTGGTTTGTC CATAGATAGA
CTAAGAAACT ATGACAAAAT AGGATTATTA AAACCTTCTT ATATTGATCC TAATAGTGGA
TATAGATATT ATTCAGAAAA TAAATTTAGA AAATTAAGGA TTATAAAATA TCTTAGAAAA
ATTGGTACTC CCTTAAAAGA AATTGATTTA ATACTAAATA AAAATATAGA TTCTCAGGAA
TTTGTGAAAT TTCTTGAACT TAAAATAAGG GATATTGAAA AGGAAATTGA AAGTTTAAAT
ATGATAAAAG AAGATATAAG TGAAATTAAG CATACCTTTG AATGTAACTT TAAACTAAGC
AACATAAATT ATATTCATAA AAAGTATATT AATGAAAGAT ATGTAGTAAA GAAAAGCCTA
AATAGAAATA TAAATTTTGT TGTTTCCCAT AGAGAGCAAG TATTTTCAAA GTTTAAATCA
GAGATAAATA CTTTAGAACC TCCTCGTTCT CTAGAAAAAG GGCTATATTT ACATAGCTTA
GAAGACCTAG AAAATAATAA TACAGAGGTT TATATGCTTC TAAAAGATTA TGAAAATATA
CATAATTTCA TTATACCTAG TGGTAACTAT TTATGCCTTT CATATAAAGA AAATGAACGT
GATAAAGCTA TTTTTAAATT AAAATCCTAT ATTGAAGAAA ATAATATTAA AGTTAAAGGT
CCAATTTTAA ATTTAGTCCT AACAACACTT CCAAAAGAAG AATTCCAATT TCAAATTTTA
ATTTAA
|
|---|
| Protein sequence | MNKYFSIGEV SKITGLSIDR LRNYDKIGLL KPSYIDPNSG YRYYSENKFR KLRIIKYLRK
IGTPLKEIDL ILNKNIDSQE FVKFLELKIR DIEKEIESLN MIKEDISEIK HTFECNFKLS
NINYIHKKYI NERYVVKKSL NRNINFVVSH REQVFSKFKS EINTLEPPRS LEKGLYLHSL
EDLENNNTEV YMLLKDYENI HNFIIPSGNY LCLSYKENER DKAIFKLKSY IEENNIKVKG
PILNLVLTTL PKEEFQFQIL I
|
|---|
| |