Gene CPF_0423 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0423 
Symbol 
ID4203950 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp506777 
End bp507568 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content28% 
IMG OID638081307 
Productendonuclease/exonuclease/phosphatase family protein 
Protein accessionYP_694880 
Protein GI110800029 
COG category[R] General function prediction only 
COG ID[COG3568] Metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTAC TTACTTTAAA CTGTCATTCT TGGCTAGAGG AAGAACAATT ATACAAAATA 
AAATACTTAG CAAAAACAAT AGTTGAAGAG AAATATGATG TTATAGCTCT TCAAGAGGCT
AGTCAAAGTA TTAAGGCTAG TATTAAAGAA GGAAATTTAA AAGAAGATAA TTATGGATTA
GTATTAATTG AAGAAATAAA CAAACTAGGT GGAGAAAAAT ACCACCTAGT TTGGGATTAC
TCTCATATTG GATATGATAT ATATGAGGAA GGTTTGTGCA TATTAACTAA GCATAAAATA
GTAAATAGTG AAAGCTTTTA TATATCAAAA AGTCACTGTA AAACTTTTTG GAGATCAAGA
AAAATAGTAA AAGCAACAAT AGATATTAAA AATGAAAATA TAGATTTTTA TTCTTGTCAC
ATGGGATGGT GGCATGATAA AGAGGAAAGC TTCACATTTC AGGTTGAAAA CTTACTTGCA
CATGCTAAGG AAAGCAAAAA TAGAGCCTTC TTTATGGGGG ATTTCAATAA TAATGCCTTT
TTAAAGAATG AAGGATATGA TTTTCTTAAG AGTAATGGGT TAATTGATAC TTATAATTTA
GCGGAAAATA AGGATTCTGG TGTTACAGTT AATAAAAATA TAGCTGGATG GGAAGATAAC
ACTGGAGAAT TAAGAATAGA TATAATTTTT ACTAATAGGA ACACAAAAGT TTATGATAGT
AGGGTTATAT TTAATGGAAA AAATAAAGAA GTTGTATCAG ATCATTTTGG ATTAGAAATA
GAAACTATGT AA
 
Protein sequence
MKLLTLNCHS WLEEEQLYKI KYLAKTIVEE KYDVIALQEA SQSIKASIKE GNLKEDNYGL 
VLIEEINKLG GEKYHLVWDY SHIGYDIYEE GLCILTKHKI VNSESFYISK SHCKTFWRSR
KIVKATIDIK NENIDFYSCH MGWWHDKEES FTFQVENLLA HAKESKNRAF FMGDFNNNAF
LKNEGYDFLK SNGLIDTYNL AENKDSGVTV NKNIAGWEDN TGELRIDIIF TNRNTKVYDS
RVIFNGKNKE VVSDHFGLEI ETM