Gene CPF_0406 details

Gene Information

• Locus tag: CPF_0406
• ID: 4201126
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens ATCC 13124
• Kingdom: Bacteria
• Replicon accession: NC_008261
• Strand: +
• Start bp: 485340
• End bp: 487358
• Gene Length: 2019 bp
• Protein Length: 672 aa
• Translation table: 11
• GC content: 27%
• IMG OID: 638081290
• Product: heparinase II/III-like protein
• Protein accession: YP_694863
• Protein GI: 110798789

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.242919
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTAATT ATTCTAATAA AATAGAGGGA TTAAAAGCAA AGGTTAATGA GTATATGCAA 
GTATATGATG CTGAGTTTGT AAGGTATTAT ATAAATCATA ATTGTAAGAA TGAAGTAGAT 
AAAAAGTTAA TAGGTTCTAA TTTAATTCTT AATAATTCTT TTATATTTGA TGATGAATGG 
GATATGGAAC AATGTAAAAT TCCATATTTA AATAGAGATT TAGATTGGAA CTTTACTCCT 
AATGGAGATG AGGAATGGGT ATTTATGCTT AATAGACATG AATACTTTGA AAAATTAATT 
GCAGCCTATT ATTTTAGTAA TGATGAAAAA TATTTAGATA AGTTAAAGGA ATTAATATTT 
AATTGGATTG AAAAGAATGA AATAAAGGAG TGTGGAGGAC CAACAATAAG AACAATAGAT 
ACTGGAATAA GATGTTTTAG TTGGATGAAG TCTCTTTTAC ACTTGATTCA TGAAAATAAA 
TTAGAAGATG AAGAAATATT AAAAATAATT TCTAGTATAA AAGAACAATT AGAGTATTTG 
AAAAAATCTT ATATTGATAA ATATGTTCTT AGCAATTGGG GAGTATTACA GACAACAGCA 
ATAATTACTT GCTCACTATG GTTAAAAGAA TTTATTGAGG ATGAGGAATT ATATAAGTGG 
GCACTTGAGG AACTATACAG GGAAATAAAT CTTCAAGTTT TAGAAGATGG TTCACATTGG 
GAGCAGTCTG TAATGTATCA TATTGAAGTA CTAAATTGTT CTATGGCAAC TATACACTAT 
GTTAAGTATT TTAATGTTGA TTTAGATGAG GAGTTCTTAG AAAAAATACA TTCTATGGCT 
AAATATTTAG TTTACTGTGG AGATTCAAAT TCAATTCAAG TTGCTCAAGG GGACAGTGAC 
AGAAGTGATA TTAGAGATGT TCTTCTTAGG GCATCTATAT TATTTAATGA TCCTCATTTA 
AAATTTAGAG CATATGAAAC TATGGATTTA ACCAGTATAT TATTGTTTGG AAGAGATGGA 
TTTTTAAAAT ATACAAATAT GGATGCAGAG GAAATTACAA AGCTTAATAA GTCCTTTATA 
GACTCTGGTA ATATTTATAT AAGAAGTGGA TGGGACAAAG AGGCAAGTTT TACTTATTTA 
CAAAATGGTA CTCTTGGAAG TGGACATGGA CATTCAGATT TATGCCATTT TTCAATTCAT 
TATGGTGGAG AACCATTTTT AATAGATTCA GGTAGGTATA CCTATGTTGA AAGTGATCTT 
TTAAGGGAAT ATTTAAAATC TGTTAAGGCT CATAATGTAT CTGTAATTGA TGATTCTCCT 
TTTGCTATTC CTAAGAATTC ATGGAAATAT AATAAATATC CAGATGTTAT GAAAAATTAT 
TTTAATGAAA AAGATAATAT AGCTTATGCT GAAATGGCTT ATTTAGCAAC TTTAAGTGAT 
GGAACACCAT ATACGGTTAT TAGAAAGGTG TTAGTTATAT CTCCAGATAT ATGGGTAATA 
GTTAATGATA TAAGATGTAG TGGAAAGCAT ATATGCAAAA ATTATTATAA TTTAGATTAT 
AAGGTTAAGG TGATTAAAGA AGAGGGTTAT TTTAGATGTG TAAATAAAGA AAGTGAAATT 
AAGATTTATA ATAACAATGT AGATAAGAAA TATATAGAAA ATACTTTAAT TTCAACAAAT 
TATAATAGTA TAAATAATAG TAAAAAGATA GTAACACAAG GTACTTTTGA AAATAATTTT 
GTGAACTATG ATATAATTTT AGGGCAGAAT TTAAAAAGTA TAGAAATAAA GGATCCTAGT 
ATTGTACAAT ATAATTCAAA AGAAAAGATT GATACAAGTG TGGCAATAAC TAAAGAATTT 
GTAATAAACG AAAATGAGAG TTATACTGTT ATAATATTTA ATAAAGAAAC ATTTAAAGGG 
GCTAAGGTAT ATATGTATGA CGATTTGGCT TTATATGGTA AGGTTATTGT TGTGCATAGA 
GTTAAAGACA AGAGAGAAAT AATTCGTTTG AAAGCATAA 

 

Protein sequence

MSNYSNKIEG LKAKVNEYMQ VYDAEFVRYY INHNCKNEVD KKLIGSNLIL NNSFIFDDEW 
DMEQCKIPYL NRDLDWNFTP NGDEEWVFML NRHEYFEKLI AAYYFSNDEK YLDKLKELIF 
NWIEKNEIKE CGGPTIRTID TGIRCFSWMK SLLHLIHENK LEDEEILKII SSIKEQLEYL 
KKSYIDKYVL SNWGVLQTTA IITCSLWLKE FIEDEELYKW ALEELYREIN LQVLEDGSHW 
EQSVMYHIEV LNCSMATIHY VKYFNVDLDE EFLEKIHSMA KYLVYCGDSN SIQVAQGDSD 
RSDIRDVLLR ASILFNDPHL KFRAYETMDL TSILLFGRDG FLKYTNMDAE EITKLNKSFI 
DSGNIYIRSG WDKEASFTYL QNGTLGSGHG HSDLCHFSIH YGGEPFLIDS GRYTYVESDL 
LREYLKSVKA HNVSVIDDSP FAIPKNSWKY NKYPDVMKNY FNEKDNIAYA EMAYLATLSD 
GTPYTVIRKV LVISPDIWVI VNDIRCSGKH ICKNYYNLDY KVKVIKEEGY FRCVNKESEI 
KIYNNNVDKK YIENTLISTN YNSINNSKKI VTQGTFENNF VNYDIILGQN LKSIEIKDPS 
IVQYNSKEKI DTSVAITKEF VINENESYTV IIFNKETFKG AKVYMYDDLA LYGKVIVVHR 
VKDKREIIRL KA