Gene CPF_0390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0390 
Symbol 
ID4203686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand+ 
Start bp468822 
End bp469433 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content29% 
IMG OID638081274 
Producthypothetical protein 
Protein accessionYP_694847 
Protein GI110799808 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAAAAG AAATTATAAA ATTTATAAAA ACTCATAAAA TAGCTCTTAT ACTAGCATTG 
ATTTTAGGGA TTTCGCCTAA TCTTATGGTT AAAGATTATT CAAAGGAATT TAATGAAGTA 
GCTCCTAAAG TTAATGAGTT AGAATATAAA ATACCTGCCT TAAAAAATAA TACAGAGCTT 
AAATCAATTC AGGAAGAAAT AGATAAATTA CAAAATGAAA ATAATACCTT AAGTAAAGAG 
GTAGAAGATA AACAAAAAGA GTTAGATAAT TTAAGAGCTA AAAAAGAGGA ACAAGTGAAA 
ATCGCACAGG AAGAATCAAA AAAAGCAGAA GAAAACTCTA AAAATAAAGG GGTTGAAAAT 
AGTAATAGCA CATCAAATAA TAACAGTAAG AATACAAACA AATCCTCTGG TGATCCATCA 
AATTTAGCTA ATTCTTCAGG AGATTCAACA CCTAAAACAG CTGGTTCAGG AGAAATAGTT 
TATTGGACAA GTGGTGGAAA AAGCTATCAT AAAAGATCTA ATTGTACAAC CTTAAAAAGA 
AGTAAAACAA TATACAGTGG AACACAGGCT GAAAGTGGTA AAAGTGATCC ATGTAATGTT 
TGTTGCAGGT AA
 
Protein sequence
MIKEIIKFIK THKIALILAL ILGISPNLMV KDYSKEFNEV APKVNELEYK IPALKNNTEL 
KSIQEEIDKL QNENNTLSKE VEDKQKELDN LRAKKEEQVK IAQEESKKAE ENSKNKGVEN 
SNSTSNNNSK NTNKSSGDPS NLANSSGDST PKTAGSGEIV YWTSGGKSYH KRSNCTTLKR 
SKTIYSGTQA ESGKSDPCNV CCR