Gene CPF_0338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0338 
Symbol 
ID4203744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp402221 
End bp402655 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content30% 
IMG OID638081225 
ProductFHA domain-containing protein 
Protein accessionYP_694798 
Protein GI110799962 
COG category[T] Signal transduction mechanisms 
COG ID[COG1716] FOG: FHA domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTTCGA AACTAATGAC ATGGGTTTTT GGAATAATAT TTATAGTAAT ACTATATTCC 
ATAATTTATT ATGCATTAAA GATAATGTAT AAAGATGTTA AAGGCGGGAA AAAGAAGAAA
GCCCCTGGAA AGAAAGCACA TGGATTAGAA GTCTTAAAGA CAATCTCTAA TGGAACTCTA
GGCATTGGCT CGGTTATACC AGTGACGAGT ACTATATCTA TTGGGCGAAG AGAAGATAAT
TCAATTGTGC TAAATGATCA GTTTGTATCA TCATATCATG CTAAAATTTA TGTTAAAAAC
AATGATTTTT ATTTAGAAGA TTTAGCAAGT ACAAATGGTA CATTTATAAA TGACTCAAAA
GTAGAGGGAA GAGTGAGATT AAAAGTAAAT GATCAAATAA GAATGGGAAG CACCGTATTT
AAGGTTATAG GATAA
 
Protein sequence
MFSKLMTWVF GIIFIVILYS IIYYALKIMY KDVKGGKKKK APGKKAHGLE VLKTISNGTL 
GIGSVIPVTS TISIGRREDN SIVLNDQFVS SYHAKIYVKN NDFYLEDLAS TNGTFINDSK
VEGRVRLKVN DQIRMGSTVF KVIG