Gene CPF_0315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0315 
Symbol 
ID4202305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand+ 
Start bp372975 
End bp373649 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content28% 
IMG OID638081202 
Producthypothetical protein 
Protein accessionYP_694775 
Protein GI110798666 
COG category[S] Function unknown 
COG ID[COG5523] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.428114 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACTGATA GAGTAGAGTG TAAACTAAAA GCCAAAGAAT TATTAAGAGG AAGATGGGAA 
AATGCTGTAG GAGCATGTTT GTTATTTTTT GTTTCAACAT TTTTATTAAG TTTTTTATTA 
TCTCCAATAC CTGTATTCGG GTGGATTATA ATTGCACTAA TCTCAACATT TTTAACTGGA 
AGCTTTATAA AGTATTGTAT TAAGCTAAAT GAAACAGAGG GAAAAGTAAA ATACTTAGAA 
TGCTTAATAA GTTTCAAGAC TACTCTTAAA ATTTTATTAT GTGATATTTT AATTGGATTA 
GTTGTAGGAA TAGGTTGGAT TATATTTACA ATGATATTTT CAGTTGCTTT TATAGCTAGT 
CAAAGCATCG TAGTATTTAT TGTAGTTCTT ATTATTTTAG TTGCTTTAGG ATTTTTTATA 
GAGGCAATAT TATTCCCTGT ACCTATGATA TTGACAGAAG ATGAGGGTGT TGGAGTAATG 
GAAGCTATAG AAATGAGCTT TAATATAACT AAGGGATATA GATGGAAGTA TATAGTTATG 
AACTTAAGCT TTATAGGATG GATGATATTA TCTTTCCTTA CTTTTGGAAT AGGTATGCTT 
TGGTTACAAC CATATATGAT GTTAACTTAC TATCTTTTCT ATAAAGGAAT AAGAAGTGCT 
AACACTACTA TTTAA
 
Protein sequence
MTDRVECKLK AKELLRGRWE NAVGACLLFF VSTFLLSFLL SPIPVFGWII IALISTFLTG 
SFIKYCIKLN ETEGKVKYLE CLISFKTTLK ILLCDILIGL VVGIGWIIFT MIFSVAFIAS 
QSIVVFIVVL IILVALGFFI EAILFPVPMI LTEDEGVGVM EAIEMSFNIT KGYRWKYIVM 
NLSFIGWMIL SFLTFGIGML WLQPYMMLTY YLFYKGIRSA NTTI