Gene CPF_0303 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0303 
Symbol 
ID4203561 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp359754 
End bp361352 
Gene Length1599 bp 
Protein Length532 aa 
Translation table11 
GC content25% 
IMG OID638081190 
Productputative ABC transporter permease protein 
Protein accessionYP_694763 
Protein GI110800164 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.816814 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAGAA TTAAATTATT ATTAAAATAT TTTATAGGAA ACTCTTTTTA TAATGCTTCT 
AGTAACATAA AATCTAGAAA TCTAGCTATA GTTATGTATA TCTTAATAAT AATAGGAATA
TCTACACCTA TAGCTAATAT GATAGATTCT ATGTACCCTA ACTTTGCTAG TATTGGACAA
GAAGGATATC TTCTTTCAAT TATATTTTTA ATTGGATCAC TAACTTTATT GGTTTTAGGA
GTTTATGATA TTTTAGATTC ATTTTTCTTT TCACAGGATA TAGAACCCTT AATGCCATTA
CCATTTAAAA GTGGTGAAAT AATGATAGGA AAATTCATAA CATGTTTAGT GGATATGTAT
ATCTATTTAA GTATTACAAT AATTCCCTTA ATATCTTTTG GGCTAAATGC TAAAATGGGA
TTTTCTTATT TTCTTATGAT TATTCCAGTT TATTTATTTG CTCCAATTAT AATAGTAATA
TTTTGCATAT TAATAACTAT GATTTTAATG AGTTTCATAA ATGTATCTAA ATATCAAAAT
GCTTTTAAAA TAATATTTGG TACATTAGGA ATAGTCTTAA TTTTAGGAGT ATATTCTTTA
AATTCAACAG GATTAAATTC AGAGAATGTT TCAGTGGCAT TAAAAAATAA GACAGCATTA
GTGGATTTAA CTAACAAAAT ATTCATAACT ACTACCTTTA GTGTAAAAGC ATTACTTTAT
AGCAATTCTT TAAAGGGATT ATTAAATTTA GGCCTTTTAA TTCTTATATC AATAGTAGCT
TTAATAATTG CATATTTCTT AGGAAAATTA ATGTATAAAA AGATACTAAG TAGAAATTTA
AATGTATATA GTGAGAGAAA GAATATACTA GAAAATAATA AGGATAAGGT TGTTGTAAGG
AGTTCAGTAA GAAAAGCAAT GGTATTAAGA GAGCTTAGAA CAATATTAAG AGATCCCAGT
AACTTTATAA ACTGTGTTGT TATGATTGTT TATATGCCTA TATTTATATT TATTTTCTTT
ATTAAAGGAA ATATTTTAGC AGGGGATACT CAGTTAGCAA AGGATACAAT AATAATGGCA
GCGACTTTTA TAGTTACAGC CTTAACCATA GCAGGTAACT CAGTTGCATC AACAGCCTTA
AGTAGAGAAG GAAAAGAAAT ATTTATATCG AAATATATTC CAGTAGATTA TAAGGTACAG
ATTCAATCTA AGCTTATAGT TTCTTTCATA GTAAATGGAT TAGCACTTAT ATTGGGAATA
GCTATATTAA TTTATTTAAA GGCATCTCCA TTGGTTATCG TAATGAGTTT ATTAGTACAA
ATGGGAACCA TAGTCGCAAT ATCTTTATGG GGAATGATTC TAGATTATTT ATCACCTAAG
TTAGAATGGA CAGATACAAA GAATTTATAT AGTAAAAATT TTAAACCTTT ATTAGTAATG
TTAATTTGCT TAGTAATAGG AGGATTTAAT ATAGGTTTAA TTGTTACCAA AAGTCCAATA
ATAGTATTTT TAATAGACAT AAGTATTCTG TTAATAGTAA GCTTAATTTT ATATAAAATT
CTTATGAAAA AAGGATTAGA GGCTTATAAA AGGTTATAA
 
Protein sequence
MNRIKLLLKY FIGNSFYNAS SNIKSRNLAI VMYILIIIGI STPIANMIDS MYPNFASIGQ 
EGYLLSIIFL IGSLTLLVLG VYDILDSFFF SQDIEPLMPL PFKSGEIMIG KFITCLVDMY
IYLSITIIPL ISFGLNAKMG FSYFLMIIPV YLFAPIIIVI FCILITMILM SFINVSKYQN
AFKIIFGTLG IVLILGVYSL NSTGLNSENV SVALKNKTAL VDLTNKIFIT TTFSVKALLY
SNSLKGLLNL GLLILISIVA LIIAYFLGKL MYKKILSRNL NVYSERKNIL ENNKDKVVVR
SSVRKAMVLR ELRTILRDPS NFINCVVMIV YMPIFIFIFF IKGNILAGDT QLAKDTIIMA
ATFIVTALTI AGNSVASTAL SREGKEIFIS KYIPVDYKVQ IQSKLIVSFI VNGLALILGI
AILIYLKASP LVIVMSLLVQ MGTIVAISLW GMILDYLSPK LEWTDTKNLY SKNFKPLLVM
LICLVIGGFN IGLIVTKSPI IVFLIDISIL LIVSLILYKI LMKKGLEAYK RL