Gene CPF_0278 details

Gene Information

• Locus tag: CPF_0278
• ID: 4200977
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens ATCC 13124
• Kingdom: Bacteria
• Replicon accession: NC_008261
• Strand: +
• Start bp: 333343
• End bp: 333942
• Gene Length: 600 bp
• Protein Length: 199 aa
• Translation table: 11
• GC content: 29%
• IMG OID: 638081165
• Product: hypothetical protein
• Protein accession: YP_694738
• Protein GI: 110799146

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.00110569
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATATTA ATAATTTTAA TTCTGAACAA ATAAAAGTTT TGGCAGAAGA GATGTCAAAA 
AACAGTATGG TTTCTTATGA TGATTTGCCA AAGTATGATT TATTTCTTTC ACAGGTTATA 
GACTATCTAA ATGATAAGTT TACGGAAGAT AAATTTACTA ATAATATAGT GCAAAACTAT 
ATTAAAAGTG AGGTAATATC AAAGCCGGAA GATGGGAAAA AACGTGGATA TACTAAGGTG 
CACTTAGCTC AATTGGTTTT ATTAAGTTAT ATGAGACCCC TATTAAAAAC CGATGAGATC 
AAAAAAGTAT TTGCTTTAGC ATTTAATGAT ATTAATGATA GAAGCGATGA TATAATATCT 
TGGGAAACGG CTTATAAGAT GTTCGGAGAA GTACAAGAAG AGAGCATAAA AAGATTCTTA 
GAGGTGCCAT TAGTTGATAA CGATAAAATA GAAGAAATAA TACAGGTTTC TGATATAAAA 
GAAGAAGATA GAGATTGCAT AGTGACTTTC CTAACTGTTA TGACATTAAT AGCACAAGCA 
AGTGTAGTAA AGAAAGTAGT GCAAAAAATA GTTAATGGAT ATCATAAAGA AGAAAAATAA 

 

Protein sequence

MDINNFNSEQ IKVLAEEMSK NSMVSYDDLP KYDLFLSQVI DYLNDKFTED KFTNNIVQNY 
IKSEVISKPE DGKKRGYTKV HLAQLVLLSY MRPLLKTDEI KKVFALAFND INDRSDDIIS 
WETAYKMFGE VQEESIKRFL EVPLVDNDKI EEIIQVSDIK EEDRDCIVTF LTVMTLIAQA 
SVVKKVVQKI VNGYHKEEK