| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_0253 |
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| Symbol | |
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| ID | 4203509 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | + |
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| Start bp | 302242 |
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| End bp | 303378 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 26% |
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| IMG OID | 638081137 |
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| Product | mechanosensitive ion channel family protein |
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| Protein accession | YP_694715 |
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| Protein GI | 110799766 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGAAT TAGAAAGACT TTTAGGAAGG CTAACAATTA TCAATATAAA AGAGATTATT
ATAATTCTTG TTATTATGAT AATTGTTTTA ATCATAAATA AAATACTAAT AAATAATCTA
TTTAAGTTAC TAATGAGAGG GGCAAGAAGG ACTAAAAATT ACTTAGATAA TAATATTGTT
AGAGCTTTAG AAAATCCATT AAAGCTTATT GTATCCTTTG TTGGAATATA TTCAATATTT
AAAGTTATAA ATCTTGATTC CTTAGGTATA GATTTTTTAT CTACATATAA GATTCTAAGA
GTAGGAATAA TAGTGTCATT TATATATTTT GCCTATAACT TAACTTTAGA AAATTCATTA
CTTTATTCTA AGTTACATAA AAATGATGGT GGTAATACTA TTGTATTTCC TTTTATTTCT
ATAATTATTA GATTGATAAT ATTGCTAGTT GGAATAATTA TAATTGCAAA TGAATTTGGC
TTAACTGGCT TTATTGCTGG GTTAGGTGTA AGTGGAGTTG CCTTTGCTTT AGCTGCACAG
GATACCTGTT CAAATTTGTT TGGGGGAATG GTAATAGTTT TAGATAGACC TTTTTCTATT
GGAGATTGGA TACAAGCTGG AGATGTTGAA GGAGTTGTTG AGGAGATTAC ATTTAGAAGT
ACAAGGATAA GAACCTTTTC CATGGCAATT GCTACTGTAC CTAATTCAAA ACTTGCTAAT
AGTAACATAA TAAATTGGAC TCAAAGAAAA TTAAGGAGAA TTCATTTTAA ATTTACTATG
GATTGTAAGA CACCAATAGA AAGTATAAAA AATTCTGTTA ATAAAATAGA AAATATGCTA
AAGAAACATG ATAAAATAGA TAAAAATTTG ATAATAGTAA GTTTTAATGA GCTTTCAACT
TATGGTTTTG GAGTTTTTAT ATATTTCTAC ACAGATGAAT TTGAATATTT AAAATATGAA
AAGCTTAAGG AAGAAATAAA TATAAAAATC TTAGAGATAT TAAGAGAAGA AAATGTTAGT
TTAATGTTTT TAAATTTTGA TTTTAAAGGT TTTGAGAGAA GATCTGGGAA TTGTAATCTT
GAAAACACTG AGTTGGAATC AATAAAAAAT ATTACTGAGG AGGAGAGAGG AGTATGA
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| Protein sequence | MKELERLLGR LTIINIKEII IILVIMIIVL IINKILINNL FKLLMRGARR TKNYLDNNIV
RALENPLKLI VSFVGIYSIF KVINLDSLGI DFLSTYKILR VGIIVSFIYF AYNLTLENSL
LYSKLHKNDG GNTIVFPFIS IIIRLIILLV GIIIIANEFG LTGFIAGLGV SGVAFALAAQ
DTCSNLFGGM VIVLDRPFSI GDWIQAGDVE GVVEEITFRS TRIRTFSMAI ATVPNSKLAN
SNIINWTQRK LRRIHFKFTM DCKTPIESIK NSVNKIENML KKHDKIDKNL IIVSFNELST
YGFGVFIYFY TDEFEYLKYE KLKEEINIKI LEILREENVS LMFLNFDFKG FERRSGNCNL
ENTELESIKN ITEEERGV
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