| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_0126 |
|---|
| Symbol | |
|---|
| ID | 4203462 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens ATCC 13124 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008261 |
|---|
| Strand | + |
|---|
| Start bp | 151037 |
|---|
| End bp | 152053 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 638081007 |
|---|
| Product | C4-dicarboxylate transporter family protein |
|---|
| Protein accession | YP_694590 |
|---|
| Protein GI | 110801381 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1275] Tellurite resistance protein and related permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.307461 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAT ATTTAGATAA GCTTCAAAAC ATGCCAATAG GAATTAGTGG AACTTGCTTG
GCATTTATAA CATTGAGTAA TTCATGGAAT TTAAAAGGAA TAAATTATTT TAAACCAATA
GCAATATTTT TAGCAGTTTG TATGCTATCT TTAATGATTT TAAGGCTGAT AAGATTCCCA
AAGGTTATGT ATGAGGAACT TAAAAACCCA GTAACAGGAA CATTTTATCC TACAATGGGT
ATGGTTGTTT GGTTAGTATC AGGATTCTTT TATCCTTACT TTCCAGTAGT ATGTAGTTGG
CTTTGGATAG CAGCTGTAAT ATATCATTAT GGAATAGTTA TTTTCTATAC AATAATCAGA
ATAAAAGAAA GAAAGTTTGA AAACATAATG CCAACTTGTT TCATAGTTTA TACAGGTATG
ATAACAGGTA GTGTAGCAAG TAAAGGTATG GATGGGGTAA TTCCTCAAAT CCCTCAAATA
GCACATTTTA TGCTTATGTT TGGATTTATA TTCTATACAA TTCTTCTACC ATTAGTTTTA
TATATAGTAT TTAAAAGTGA AATATTAGAT GATCACAAAT TACCAACAGT AGGTATAATT
TGTTCACCAG CTCCACTTGG AGTAGTTGGT ATATTAACTA TAGAACCAAA CCCTAACCCA
TACATGTTAG CTTGGTTAAT AATAACAGGA TTAATATTAC TTGTTGTTGT TTATGGATAC
ATTTTAAAAC TATTTAAAGA AGGTTTTAAA CCATCATACG CAGCATTTAC ATTCCCATTA
GCAATTGCTA CTTTATCAGC ATTTAAGTTA TCAACTTATT TTACTGGTTT AGGATATGCT
AAAATGGCTA ACTTATTTAA ATTCTTAGGT GATGTTGAAA TATTTATAGC AACATATGTA
ATATTCTTTA TGCTACTTAA CTTCTTAAAT ATGTTCTTCA AAGCTATAAG TCCAAAACTT
GGAGAATATG TAGAGGAAGA AGAAGAATTA ATAGGTGGAA CTCTTTATTC AAAATAA
|
|---|
| Protein sequence | MKKYLDKLQN MPIGISGTCL AFITLSNSWN LKGINYFKPI AIFLAVCMLS LMILRLIRFP
KVMYEELKNP VTGTFYPTMG MVVWLVSGFF YPYFPVVCSW LWIAAVIYHY GIVIFYTIIR
IKERKFENIM PTCFIVYTGM ITGSVASKGM DGVIPQIPQI AHFMLMFGFI FYTILLPLVL
YIVFKSEILD DHKLPTVGII CSPAPLGVVG ILTIEPNPNP YMLAWLIITG LILLVVVYGY
ILKLFKEGFK PSYAAFTFPL AIATLSAFKL STYFTGLGYA KMANLFKFLG DVEIFIATYV
IFFMLLNFLN MFFKAISPKL GEYVEEEEEL IGGTLYSK
|
|---|
| |