Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_0089 |
Symbol | |
ID | 4203284 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 106517 |
End bp | 107275 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 638080970 |
Product | formate/nitrite transporter family protein |
Protein accession | YP_694553 |
Protein GI | 110801109 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2116] Formate/nitrite family of transporters |
TIGRFAM ID | [TIGR00790] formate/nitrite transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAAAAA AAGATATAAA TTTAATTTCA GACATGGCAG TTAATAAGTT TAAGTTTGCA GATAGAGCTC CTATAAAGTA TTTTTTTAGA GCTATAGTTG CAGGATTTTT CCTAGTAGTA GCCATAATTC TTTCATATAC TACTGGAGCG GTTTTAAATA ATTCATATCC AGAGATAGCA AGAATAATGG TAGCTGCAAC CTTCTCTTTA GCATTAGGGC TTATTGCTTT TATTGGAGGA GAGCTCTTTA CAGGAAATAA CTTAGTCATG TCAATTGGGA TATACAACAA TGAGTGTACC TTAACTATGG CATTAAAAGT TTGGTTTATG AGTTATTTAG GAAATTTTAT AGGATCTATA TTATTAGGGT TTTTATTTGT TAAGAGTGGA GCATCTATGG ATTTAATTAA GGATTATGCT AAAGGTATAG TTGATATAAA ACTTAATTTA CCTGCTCTTG AACTCTTTTT AAGAGGTATG CTTTGTAACT TCATGGTTTG TATAGCATTT CTAAGCACAA TAAAAATGAA ATCTGAAACA GGCAAATTAA TAATTATGTT CTGGTGTATA TTTGCATTTG TTATCGCTGG TTTTGAACAC AGCATTGCTA ATATGGGAAT ATTCTCTATA ACTTATTTCG CCTCAGGTGA TGTAAGTTTA CCACTTGTTT TCCGTAATTT ATTTTGGGTT ACATTGGGAA ATATGGTAGG AGGGGGAGTG TTATTAGCAT TGCCACTTAA ATTTATGAGC ATGGAATAA
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Protein sequence | MQKKDINLIS DMAVNKFKFA DRAPIKYFFR AIVAGFFLVV AIILSYTTGA VLNNSYPEIA RIMVAATFSL ALGLIAFIGG ELFTGNNLVM SIGIYNNECT LTMALKVWFM SYLGNFIGSI LLGFLFVKSG ASMDLIKDYA KGIVDIKLNL PALELFLRGM LCNFMVCIAF LSTIKMKSET GKLIIMFWCI FAFVIAGFEH SIANMGIFSI TYFASGDVSL PLVFRNLFWV TLGNMVGGGV LLALPLKFMS ME
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