| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | COXBURSA331_A1772 |
|---|
| Symbol | mrpD |
|---|
| ID | 5793372 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Coxiella burnetii RSA 331 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010117 |
|---|
| Strand | - |
|---|
| Start bp | 1618098 |
|---|
| End bp | 1619597 |
|---|
| Gene Length | 1500 bp |
|---|
| Protein Length | 499 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 641331132 |
|---|
| Product | Na(+)/H(+) antiporter subunit D |
|---|
| Protein accession | YP_001597420 |
|---|
| Protein GI | 161829867 |
|---|
| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCTAT TACCAATATT ACCGTTATTA ATTTGTCTAA TTACCGCAAT CTTATGTTGT
TTTTTTTGGT CGTTTGAGCG GTTACAAAAA ATCTGTCATT TAACCGGCGC AATAGTGTTA
TTAATGGCGG TTATTGTGAT TTTCATTTTC GTGACGCAGA AAGGAATTTT GGTCATGCAA
ATGGGGGATT ACCTCGCGCC TTTCGGAATC AGCATCGTTA TTGACCTGCT AAGCGCTATT
ATGTTAGTAG TGACTGGGCT TATTGCATTA TGCGTGGCAA TTTATGCCTT ATCCGACATT
AAATCCACTC AACAAAATTT AGGTTTTTAT CCGGTCTATT GGATTTTACT GGTTGGTATT
TGCGGAGCTT TTTCGACAGG TGATATGTTT AACCTTTATG TTTGGTTTGA AGTGATGCTG
ATTGCTTCTT TTGTGTTGAT GGCGCTCGGC AATGAACGGA TTCAGTTGGA TGGAACGATT
AAATACGTAG CTATGAATTT AATTGCTACT ATTTTAATGC TAACCGCAAT TGCAATGTTG
TATGGAATAG TGGGCACTTT AAACATGGCT GATTTATCGG TGCGCCTATC ACACTATCCG
AACGCTTCTA TTGTAATGGC GGTTGCGCTA TTGTTGGCTA TTGCATTTTC TATTAAAACC
GCTTTATTCC CTTTGTTTTT CTGGCTGCCG GCTTCTTACC ACACCACCAG CGTTTCGGCT
TCTGCTATTT TTGCTGGCAT GCTGACTAAA GTCGGCGTTT ATACTTTAAT CCGATTGGTT
ACCTTGATTG TTCCTAATAA TCAAATAATT TTAGGTTTAT TATTGGTTTC TTCGGGATTA
ACGATGTTAA CCGGAGTATT GGGTGCAGCA TCACAATATA ATTTTCGACG AATTTTATCT
TTTCACATTA TTAGTCAAAT TGGTTACATG GTGATGGGGC TTTCAATTCG TACGCCGTTG
GCGTTAGCCG GTGCTGTGTT TTATATTGTG CATCATATTA TAGTTAAAAC GAATTTGTTT
TTAATCAGCG GCATTACAAA CCGTTTAGGT AAAAGTTTTG ATATTCGAGC CTTAAGCGGT
TTTTATCGAC AGTCCCCACT TTTAGCTATA TTATTTTTTA TCCCTGCTTT TTCCCTGGCA
GGTTTTCCGC CGTTATCTGG TTTTTGGGCG AAGCTATCTT TGTTGCAAGC AGCCTTTACA
AACCACAATT ATATCATTGC GGCGATTGCC TTAATCGTTA GTTTTTTAAC GCTTTATTCG
ATGATTAAAA TATGGAATCA AGTTTTTTGG ACGGATAAAT CTCAATCTAA AAAAGAAGAT
CACGCGTTGC TTTCAACGGG CGAAAAATTT TCTTTATTTG TTCCTGTTAT TTTATTGGTG
AGTATTACTT TAGCAATCGC ATTTTTTCCC CAATTATTTT TTCAGGTAAT GAGTAAGGCA
TCCTCCCAAT TATTAGATTC GAGTCAGTAT GTCCGTGCAG TTTTAGGAGA CAGGCAATGA
|
|---|
| Protein sequence | MKLLPILPLL ICLITAILCC FFWSFERLQK ICHLTGAIVL LMAVIVIFIF VTQKGILVMQ
MGDYLAPFGI SIVIDLLSAI MLVVTGLIAL CVAIYALSDI KSTQQNLGFY PVYWILLVGI
CGAFSTGDMF NLYVWFEVML IASFVLMALG NERIQLDGTI KYVAMNLIAT ILMLTAIAML
YGIVGTLNMA DLSVRLSHYP NASIVMAVAL LLAIAFSIKT ALFPLFFWLP ASYHTTSVSA
SAIFAGMLTK VGVYTLIRLV TLIVPNNQII LGLLLVSSGL TMLTGVLGAA SQYNFRRILS
FHIISQIGYM VMGLSIRTPL ALAGAVFYIV HHIIVKTNLF LISGITNRLG KSFDIRALSG
FYRQSPLLAI LFFIPAFSLA GFPPLSGFWA KLSLLQAAFT NHNYIIAAIA LIVSFLTLYS
MIKIWNQVFW TDKSQSKKED HALLSTGEKF SLFVPVILLV SITLAIAFFP QLFFQVMSKA
SSQLLDSSQY VRAVLGDRQ
|
|---|
| |