Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | COXBURSA331_A1051 |
Symbol | dedE |
ID | 5794157 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Coxiella burnetii RSA 331 |
Kingdom | Bacteria |
Replicon accession | NC_010117 |
Strand | - |
Start bp | 932678 |
End bp | 933232 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 641330508 |
Product | colicin V production protein |
Protein accession | YP_001596810 |
Protein GI | 161831023 |
COG category | [R] General function prediction only |
COG ID | [COG1286] Uncharacterized membrane protein, required for colicin V production |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACTCTC ATCTCCTCTC TCATTTAAAT TGGGTTGATT TTGCGATCAT TGGCATTATT CTTTTTTCGA TCATTATCAG TTTTTTTCGT GGATTCGTGC GAGAGGCTGT TTCATTGGTC GTGTGGGTGG CTGCCATTAT CGTTGCCATT AAGTTTGTCG AACCCGTACA AATATATTTG CAGACCTGGA TTGTTTCTTC TTCTATACGA TACGCTGTCG CCTTTATCAG TTTATTTTTA TCCGTTTTCA TTATCGGTAT TATTTTAAAT ATGCTTATTC ACGTTTTATT AAAGAAAACC GGTCTTAGCA TTACCGATCG ATTATTGGGG ATTTTCTTCG GCGCTGGGCG AGGGTTTTTA ATTGTTGCTG TTTTATTGTT GTTCGTTAGT ATTGGGAGTG TCGAAGATGG GAGTTTGATT GCGCAATCGC AATTAGCCCC TAAATTTCAA CCCATCGTGA GTTGGTTGAA CCAATTTCTG CCTTCGCAAT TTAAACAGTT TTCACATTGG TTGGCGGATC AGCCCGTCTC AAAGGTCAAT AATGGTGATA GGTAA
|
Protein sequence | MNSHLLSHLN WVDFAIIGII LFSIIISFFR GFVREAVSLV VWVAAIIVAI KFVEPVQIYL QTWIVSSSIR YAVAFISLFL SVFIIGIILN MLIHVLLKKT GLSITDRLLG IFFGAGRGFL IVAVLLLFVS IGSVEDGSLI AQSQLAPKFQ PIVSWLNQFL PSQFKQFSHW LADQPVSKVN NGDR
|
| |