Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNN01340 |
Symbol | |
ID | 3255477 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006683 |
Strand | + |
Start bp | 401231 |
End bp | 403005 |
Gene Length | 1775 bp |
Protein Length | 406 aa |
Translation table | |
GC content | 50% |
IMG OID | 638254549 |
Product | expressed protein |
Protein accession | XP_568591 |
Protein GI | 58262362 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.160188 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | AACGTCTCTT CCGAAACAAA ATGAGCAATG CTCTGCCAGA AAAGAATGTC GTGCTGAGGT TTCCTCCTAT GCCGAAAGGG CAGGAAGATA TCCAGGAAGA GACATATCAG CTCTTGGAGC TGCCTCCGGA GCTTCTTAAA GAGGTGGAAG CGTTGAAAGA CAAGGAAGAT GGACAGGTTT TTCCGTAGGT CATATATCAA GCTCACGATG TCAGCTAACG CAACAATAGT CTCACGATAA AAGGCAGACC ATCAGACGAT GCTACGCTTT GTACTGCCGA TTCGACATTT CTCCTCCGTA CAGTGGGCAT TTCAAACTCC CTCCTCGTTT GTCTACCACC ATCGCCCAAC GACCCATCCT ATACACTCAC CACTGACGAA GAAGATCGAC CTACTCTGCA AATAAGAGAT ATATGCCACC AGGTTCTCGA GTGCGTACCC GTGGCCCCAA ACTTGGAGAG GATTAGAACG GTGTTAAGGG CTTCCGCTTG GGAAGGGATG GGGAGCGGGG GGTTGGGAAA GAGGAAAAGG GAGGATGGAG ATGGACGGAA AGTGAAGAGA TGGACAAAGG AGCAGTTACG GAGTGTAGTA CAGGCTAGTG AAGCTGAGTT GGAACAAGGA TTGAAAGAGA GGAATGTGAT CGAGGTTGAC GGTGGGTTTT GATTTCCACA AGCTCAGACT GACGTTTCAG GGCGCATGCT GTTACTTCCT TCCGTTCATT TGAAGGATTT CCTAAACATT CTTCTTTCAC TCCTTGCAAT CAATTCCTCA AAGCCAGCCA CTACGGCCCC CGCTCAAACT ATAATCGCTG CTCTAGAAGA GTACGATGTT CCTCCTTCTA TATCAGTACC CGCCCTCAAT CTGTTTGGCA CAGTGGAGGA CGGACAGTGG ACGGCCAACG TCGAGAGGAT GGTCAGGGAA GTAGGTCTGG GTATTCTCTG TGCGGTCAAG AAAAATAAGA AACGTGATGA ATTTATGTCG GAATGGCAAG AGGAAGTAGG AGAGACATGG CGTGAATATA CGGATCTCAA ACTCCTAGAG GTGCGCGTCA TCTTCTTTTT GATCAGTAAA ACTTGTTGCC AACTGCCGTC TGCTCCAGGG CGAATACATC CTTTCTCCAC CTCCACCATC AGCGCTCTCA TTCGCTTCCC CTTCACCATT ACTGAGCTAT TTCCCCCTCG CTTCCCTGCC TCTCCAACCG GCCGAGCGGT TCGCCGAGCT TTTCCTTACC CGCCAACGAT GGCGTCCCGA GGAGATGGCT CCTTTTCTTA GAGGTCTCAC GAGAGACGGG GATAGTAAAG GCAGGGATAA GTTGGTTGCC AAGTTTGTCA GGATAGTCAA GGAGAAAGAT GGGACATGGT GGTATCCTCG CAGAAGTGCG TGATAATGAT GGGTTTATAC ATGGAATACG GTATGTTGTA TAAAACTATT TCAAGTGTGC TTGGTGATTA TATGTTACGA TTTGAGAGGA GGATCAAATG TTGGAGGAGG TCCTGAAGGT CCTTGGTCGT ACGCGGCTGT TTTCATGATC AGCACAAGCA TCCTCATCTC TCAAAAGAAT ACTACTCACG CAAGTCTTCT TCATCCCTTC CTCTCTCCTC AGCTCTGGAT CTCTCTCCCT CAATAATCTT CCACACCGCA TGTCCCGCCC CCTCCCCGAC GATAATCTTG GCTTCCAAGA CCTGGCCCGT GCCGGGATCA GGCAGCGAGT TGGATGACGG AGAAGGCAAG AAGGACATAC GAATATGGTT TGCGGAGAAT GTGGGAAGGT TGTAG
|
Protein sequence | MSNALPEKNV VLRFPPMPKG QEDIQEETYQ LLELPPELLK EVEALKDKED GQVFPLTIKG RPSDDATLCT ADSTFLLRTV GISNSLLVCL PPSPNDPSYT LTTDEEDRPT LQIRDICHQV LECVPVAPNL ERIRTVLRAS AWEGMGSGGL GKRKREDGDG RKVKRWTKEQ LRSVVQASEA ELEQGLKERN VIEVDGRMLL LPSVHLKDFL NILLSLLAIN SSKPATTAPA QTIIAALEEY DVPPSISVPA LNLFGTVEDG QWTANVERMV REVGLGILCA VKKNKKRDEF MSEWQEEVGE TWREYTDLKL LEGEYILSPP PPSALSFASP SPLLSYFPLA SLPLQPAERF AELFLTRQRW RPEEMAPFLR GLTRDGDSKG RDKLVAKFVR IVKEKDGTWW YPRRSA
|
| |