Gene CNN01230 details

Gene Information

• Locus tag: CNN01230
• ID: 3255303
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006683
• Strand: +
• Start bp: 372224
• End bp: 375868
• Gene Length: 3645 bp
• Protein Length: 968 aa
• GC content: 47%
• IMG OID: 638254538
• Product: response to pH-related protein, putative
• Protein accession: XP_568740
• Protein GI: 58262660

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTGTCTA CGCCTATCGC AGGTCACAAT AGCCCAGGCA ACCCTCAGAT CCTCAACAAC 
TCGGGCTCGA CACCGGCTAG CGATGCAGTT TCAGAGAATG GAGAGGAGGA ATCATTTGTC 
GAAATTGAAG AACGTGGAGA TGACAAGATG AGAAAAATAG CTAAGAGCTT GAGACCCGGT 
GATATGGTAG AGGAAGCACA TGTGAGTGTT GACCTGTTTA TCTTCCGAGT CCTTGTTAAT 
TATGGGAGGG CCTTAGAATA TCGTGAGGAT AGTAGGAGTA GATGCTTGTC GTGAGTCTTA 
CTCGGCTTTG AGGTAACTTT TGAGACTGAC CCTTCATCTT AGCCGGTCTT CTTATATTGG 
GAAAGAAGAA TCTTTACCTA ATTAACGGAT TGCTTCAAAC TCCCGGTGGA GAGGTCATCG 
ACGCTAAGGA TGCTCAAAAG GACGTCCTGT CTATTCCTTC GGGTACACTT GTTGAGCTGG 
ACGCTGATGA CCAGCCGAGT CATTGCTGGT ATGTAACATG GCGTTGCTAA ACCTGATACT 
TGTGACTGAC TGCGTGAACC ACGTAGGCCT TACAATGAAA TTATTGAGAA TAACAAACGT 
GCATTTCTCT TCCGCGATGT GGCCCTGGAG CTTTACTTCT CTGATAAGCG CAACTTCCTT 
GTTGTTTTCC GGGACAAGAG GGAAAGACAA GCCGTCGTGC AGAAGATCAG CAGCAAGAAG 
GATCACCGCG ATGTTATATC GAAGAGCGTC ATTGGTAACT TTGTCCTCGA TACAGTTGCA 
AAGGCCATGG ATAAGAGCGA ACAACAACTG GAGGCGCTGC AAAAGAAATG GCAGAACCGG 
GAAATCAGCA ATGTGAGTAC TCATTGATAA CATTGGCAAG CGTGTTAACA TGTGATATCA 
GTTTGCGTAT TTGCAACTTT TAAATCAGTA TGCCAATCGT ACGCCCAACG GTGAATCGCT 
TTCCTCATCA TTACCTGAAT TACGCTAATA CACCTGACTA GACGTCACTC AATACCCTGT 
GTTCCCATGG GTTGTAGCGG ATTACTCATC AGACCATCTG GACCTCAAGA CGGAATCCTC 
TTTTAGAAAT CTTCGTTTCC CCATGGGTGC TTTGACACTA GCCAGAAGAG AAGAGGCCAT 
GGAGCGCTAT GCTGCGACAG AAAGCGTCGG TGAAAAACCT TTGTAAGCTA TCCTACTTTA 
AGACTGATGT GAATTAACGT CTTCGCAGCC ATTATGGAAC ACATTATAGC TCATCGATGA 
TCGTCTGCGG CTACATGATT CGTCTTTCCC CCTTTACAGA GATATTCTTA GCCTTACAAG 
TGTGTAAACC CTCCAATGAA AACGAAACTG TCGCTGACTG CTATCCGTAG GGCGGTAATT 
TTGACTTGGC TGATCGTCTT TTCTCAAGCA TTCCAAGGGC TTGGGTGTCC GCTTCTTCAG 
ATAATCGTGG CGACGTGCGA GAGTTAATCC CCGAATTCTA CTATTCGCCA GCTTTTTTGA 
TGAATCTCGT GAGTATTACC AATAATGCCT GTGTGCGGAA TACTGAAGTA TTGCTAGAAT 
CACCATAACT TTGGAAGAAA ACAAGTATCT GGTGAAGCCG TGGACGATGT TGCCCTACCA 
CCTTGGGCGC TTGGAGACCC TCATTTATTC ATCCATCGAC ACCGGGAAGC GCTGGAGTCT 
GACTATGTCT CTCGCCATCT CGCATCTTGG ATCGACCTTA CTTTCGGTTA TAAACAAAGG 
GACCCGGCTG CCTTTAATTG TTTCCATCCC TTATCATATC GAGGTGCCAT AGACCTGGAA 
AACATTGAAA ACGAAGAAGA AAAGGCAGCC TCCACAGCAA TCATTCACAA CTTCGGTCAG 
ACGCCAAACC AAATCTTCAA ATCCCCTCAT CCGCACCGTT TCCTCGGCGG GCAAAGTGAC 
CTACCCGTGG GTGTGCGATT CGGCGTAGCG GAGCACTGGC AATTAATGCT TAGGAGCATA 
CTCCCTATCA CTGAGACAAT AACTTCGATA GACCATATTG ATCCTCCTTC CGGTCCAGAT 
ACGAAGCCCA AGTTGTCACA AAGATATAGA CTGTCTATTC CAGGTTCCTC ACACTTGACA 
GTGCAGTATG GCTTCGTGGA TGGTTCTGTA AGAATATACT ACCAAGATGT CGTTGCCAAG 
GTAAATTGTG GTATTCTTTT TCTCAAAATA GTGACTCCAA CTGACAAGAT GTCCAGCTCG 
TCTACCTCTG TGAGGGTATA TACCCTGTGA ATGCAGTTTT CGCATCATCT TCACTCTTTC 
TCACTGTGTC ATCGCTTGGT GTCATCACTG CGTGGCGTAT CAACGTCAGT GGTGCGGGGT 
ATCGCCGAGG AGACGTGACA ATGCAGCGTG AAGCGACTCT TAGAGGTCAT TCTCGTCCAG 
TAACTTGCTT GGCTGCAAAC ACATCATGGA GTATACTCGT TAGCGGGGCA GAGGTAAGTG 
GCTCAGGTGG TACAGATCAG TTTACTGACA TTGAAGCTCG TAGAACGGGG ATGCTATGGT 
ATGGGATACA AATCGTTTGC GATATATCAG GACTTTGCAG ACCGGGAAAA AGGAGTCTAT 
TGAATATTGC GCTATCAACG AAGCTGATGT GAGGCGCTTT TCTTGGACAT ATGTCTCGCC 
GAGCTGACCG CTTGTTCGCC AGGGCCTAAT TGCCGTGGCC AGTAGAAAAC ACGTATTTCT 
TTTCTCACTT AACGGCCACC AAATTGCCTC GATCAGTATT GGCGATTGTA TCTCTTCCAT 
CGAGAGCGAC GCAGAATCCG AAATCTCCGA GGAGCCTTAC GAGGACGAGT TTACAGGTGG 
CATCACTTTC TTGAATCGAG AATTTCTAAA GTTCGGTGCC CTGTTTGTCA CTGGAGTTGG 
TGCGAGGATT GTTCTTTTCC GTTGTGCCCC AGGGGAGATC AACGTCTTCA ACCCGGGTCC 
TATGATGCCT TGGGCACTCA TCCCACAAGG AGTGATCCAT CGTTCAGATG ATCACGAAGG 
AGGTGATTGC TGTTCGGTAA AGTTTATTGG GTGAGTCATT AAAATCCAAC TTCATAACTA 
AAAAGTAATC TGACCCGACT ACAGCGAGAC ACTTTACGCT GCATTCAATC CTAGTGAGGG 
AAAGAAGAAA TTCTCTCTAT ACCAGTGGTC TTTACCCGAC GGTCACGCCA GACATGTGGC 
CGACTCTGCT TCTCATACTT GCATGGCTGA AAGATGTACT AGGCATTTCG GCCTTCTTGG 
TGAGACATGT CGTTCACTAT GCATAGTCTA CGCTGACAAA CGTTATAGAG CCCAAACGCC 
ACTGTGGAGG GTGCGGAGGT GCATTTTGCG GGTAGGTGAC CAAGAACGGC TTTGCAGTGA 
TCTGTGCGGG ACTAACTTGT AGACCTAGGA CCCATGCGCT TCATGTCGAG ACGTTCACTA 
TGCGTTATTG TGACTCCTGC CGAGCTCAAC TATCGATCGC TTCAGCTCAA GGGTTCCTTA 
ATTATCGTCG AGATAATCTT ATACCCCCAT CGGGTCAAAG TTCAAGGCGC CCATCGATCT 
CTTACGACTC TCGAAGCGGT CGCCCATCCT TCGCAAGGAC TCCCAGCCAA CCTGGTTCGA 
GTAGAAGAGG TTCAGGCGAC CCTGAAGCTA CAACGTAATG TCGCG 

 

Protein sequence

MVSTPIAGHN SPGNPQILNN SGSTPASDAV SENGEEESFV EIEERGDDKM RKIAKSLRPG 
DMVEEAHNIV RIVGVDACPG LLILGKKNLY LINGLLQTPG GEVIDAKDAQ KDVLSIPSGT 
LVELDADDQP SHCWPYNEII ENNKRAFLFR DVALELYFSD KRNFLVVFRD KRERQAVVQK 
ISSKKDHRDV ISKSVIGNFV LDTVAKAMDK SEQQLEALQK KWQNREISNF AYLQLLNQYA 
NRTPNDVTQY PVFPWVVADY SSDHLDLKTE SSFRNLRFPM GALTLARREE AMERYAATES 
VGEKPFHYGT HYSSSMIVCG YMIRLSPFTE IFLALQGGNF DLADRLFSSI PRAWVSASSD 
NRGDVRELIP EFYYSPAFLM NLNHHNFGRK QVSGEAVDDV ALPPWALGDP HLFIHRHREA 
LESDYVSRHL ASWIDLTFGY KQRDPAAFNC FHPLSYRGAI DLENIENEEE KAASTAIIHN 
FGQTPNQIFK SPHPHRFLGG QSDLPVGVRF GVAEHWQLML RSILPITETI TSIDHIDPPS 
GPDTKPKLSQ RYRLSIPGSS HLTVQYGFVD GSVRIYYQDV VAKLVYLCEG IYPVNAVFAS 
SSLFLTVSSL GVITAWRINV SGAGYRRGDV TMQREATLRG HSRPVTCLAA NTSWSILVSG 
AENGDAMVWD TNRLRYIRTL QTGKKESIEY CAINEADGLI AVASRKHVFL FSLNGHQIAS 
ISIGDCISSI ESDAESEISE EPYEDEFTGG ITFLNREFLK FGALFVTGVG ARIVLFRCAP 
GEINVFNPGP MMPWALIPQG VIHRSDDHEG GDCCSVKFIG ETLYAAFNPS EGKKKFSLYQ 
WSLPDGHARH VADSASHTCM AERCTRHFGL LEPKRHCGGC GGAFCGTHAL HVETFTMRYC 
DSCRAQLSIA SAQGFLNYRR DNLIPPSGQS SRRPSISYDS RSGRPSFART PSQPGSSRRG 
SGDPEATT