Gene CNN00090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNN00090 
Symbol 
ID3255459 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006683 
Strand- 
Start bp31594 
End bp32631 
Gene Length1038 bp 
Protein Length313 aa 
Translation table 
GC content66% 
IMG OID638254425 
Productribosome biogenesis-related protein, putative 
Protein accessionXP_568518 
Protein GI58262216 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG5225] Uncharacterized protein involved in ribosome biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0451949 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGTCT CCCACGTGCT CGACGAGTAC ACCGCCAGCA AGTAAGTCGT GCCAGCTCCC 
CCCGTGTCAT CCCCCGCTGA CAGCCGCAGC ACCACCGCCG TCCTCCCCCG CGCCGCACCC 
GTCCACACCG ACCCCGCCCT GCTCGCCGCC TTTGACGCCT CCCCCCTCGA CCCCGCAGCG 
TACGCCGACC GCGAGCGCCA CCTGCTCCAG CTCACCCTCA CCTCCACCCA CGCCCTCGTC 
GCCGCCCTCT TCGCCCTCCC CACCACCCCC TCCTCCGCCG GCCCCGTCAC CGCCTTCCCC 
CCGCCCACCA CCCTCCTCCC CAGGGAGAAG CCGCTGCCCA CGCCAAAGGC CCCCACCAAG 
TGGGAGCGCT TCGCCAAGGA AAAGGGCATA AGCCACAGGA AGAAGGAGAA GGACGTGTGG 
GACGAGGAGC GCCAGGAGTG GGTCCCGCGC TGGGGCAGGT TTGGCAAGAA CAAGGACAAG 
GAGGACCAGT GGCTGCATGA AGTCAAGCCC GGCGACGGTG CGTCTGTCTT TCGTCCTGTT 
GACTTTTTGC GCTGACGCTT TCCAGAAGCC GACCAGGACC CGGGAAAGAC GGCGCGCGGC 
GAGCGCAAGG CGCGCATCGC CCAGAACACC AAGCAGCACT CGGCCAACCT CGCCGTCGCC 
TCGGCCTCTG TCACCGCCGC CCGCGCCACC GCCGCCTCGG AGCGCGCAGC CCGCAAGGAA 
GAGCTCAACA GGAACATGCT CATCTCCAAG ACGTCCACCG CGTCCTTGGG CAAGTTTGAT 
AACAAGATTG AGGGCGAGCC GAAAGCGAGG GGCATGAAAC GGAAATTCGA CGCGAATATC 
CCTGGTGGAA GCGAGGGCAC GGAAAAGGAG AGGCAGCTGT CCGTGCTCAA GCGGGTCGAG 
AGGGGCGAAA CGAACAAGTC GAAGAGGGGC GGAGAGGGTG TCCAGGGCGG GTTGAATGTG 
AGGAAAGCGC TCAGGTTTAG TGGGGAAGGT GGGAAACTGA GGCCAAAGAC GACGGGCAAG 
AAGGGCAAGA GAAAGTAG
 
Protein sequence
MDVSHVLDEY TASNTTAVLP RAAPVHTDPA LLAAFDASPL DPAAYADRER HLLQLTLTST 
HALVAALFAL PTTPSSAGPV TAFPPPTTLL PREKPLPTPK APTKWERFAK EKGISHRKKE 
KDVWDEERQE WVPRWGRFGK NKDKEDQWLH EVKPGDEADQ DPGKTARGER KARIAQNTKQ 
HSANLAVASA SVTAARATAA SERAARKEEL NRNMLISKTS TASLGKFDNK IEGEPKARGM 
KRKFDANIPG GSEGTEKERQ LSVLKRVERG ETNKSKRGGE GVQGGLNVRK ALRFSGEGGK 
LRPKTTGKKG KRK