Gene CNN00020 details

Gene Information

• Locus tag: CNN00020
• ID: 3255347
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006683
• Strand: -
• Start bp: 5099
• End bp: 7366
• Gene Length: 2268 bp
• Protein Length: 615 aa
• GC content: 47%
• IMG OID: 638254417
• Product: transcription factor, putative
• Protein accession: XP_568510
• Protein GI: 58262200

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.155457
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATTTGCCAAA AATTGAGCTT GGTTCAAATT ACTGAGTCTG ACAATGTCTA TACAGTATTG 
TCGCAGCTGA TAGCTAGATC ATCTTGTCGC CGTCGTCTAT CACCATCTCC CAGCTCCCAC 
CACAGCAATG TCTAGCTTAT CATCTACATC TTTAGAAGAC GCCCGGCCCT CTCCTCCTGC 
ATATGCACCA CGAGCCCAAG CTTGCGTTCG GTGCCATCTC AGAAAACGAA AGGTGAGAAA 
GATATCTATG AGTAATGCTG TAGATTATTT GATAAGCTTG ATGTGCTGAC TGATCGCACC 
CAGTGTAATC GAGCTCTTCC AAGATGTGGT GCATGTGAGA GAGCAAACGC CGAGTGCCAA 
GTATATAACA AAAACCACGA TCAGGGTCTC ATCGAGTGAG GAGTTCCGTT CTATATTTGC 
TATCCATACT AATAGATTGA TATAAAGGGA GATCCGCTCT CTCAAGAATC GGATAGCATG 
GCTCGAGGAC ATTGTCATAA AGGTTGATCC TCAATGGGCA GACATAGTGA CTATACCGAC 
GGGGCAAGCT TTGCCCGCAC GGGGACAATA TCATCCCCAG CCGCCCTCTG TTCCTCCCTT 
ATCAGAAACC GACGATCAGG CATCCTTCCT TTGCCAAAGC CGTCAAAAGT CAACAATATC 
TTCCATCCCC AACGTCTTTT CCCATGTCGT CCGTCACACA CCACTGAATC ACTGTTATCC 
GGAGACATTC CTGTATATGA CGCCATTGCC GTTACAGACT ATTGATGACC ACTTGCGAGT 
GGACCTCTCG ACGTTCAACT CGATACAAGT TACCCCTGCC CCAGAGACCC CTTTCAGTAC 
GAGAGTCCAG TCACTCAACA TACTGTCCTT TGAAGACGCA ATAGAGCTTG TCAAGCGCTA 
CACTGGAGAT CACAAGTTCT CGCATCAAGT GACCAGTTTT CAGCAACTAG AACATGATGC 
CAAGCTTGTG TACTCGGAGG AAGGTCTATC CAATTCCGAT TACTATGCCA GTCGTTTCAG 
GCTTTTCATT GTTGTCTATC TATCGGGCAT CCTTGGATAC AAGAAGACTG ATCTCACAGC 
TTGGAGACGG TACAGAAAAA TGGCGATGAT GGAGATACCC CACATTCTGG TTCATGAAGA 
TCTGGTATGT AGTAGGTCGC CCTTGCCAAT ATCTGCTAAC TACAGGCAAT GATAGACTTG 
CGTCCAAGCT CTCACACTTC TTGCATCGGT AGCGATATAT GAGTCGGATC TGAATGTTTG 
GCGCATCCTT GGCATGGCTT CCCACACAGC TATAGCTATC AACCTGCATC GTAAAGACGA 
GATATTCCTG CCGCCATATC TAGTCACAAT GGACCCACCC ACCGTTGAGC GGTTCAACGA 
GCAACGGAAA AACATCTTTT GGACATTATA TGTCCTAGAT CGTCTAGTGC TGTCTTGCTT 
TGGATATCCT CCATCTATAC GGGATGATGA TATCGATATT GACGTGAGCA AAACGTGGTT 
CATTTCTGGC TGGCGGCCTA ACTGACTTGG TGCATTAGCA TCCTATTTGC CCGCCCACCA 
CCGGCCCGAG CCCATCGTCT GAGCTGTGCC ATGCCATCAT TGGTAGGCGA CTTTTGGGTC 
AAATCCATGA ATCACTGTAC TCTCCGTCTG TACGGCCTAA TGAGAATGGC GAGCAGATAG 
TAGCCAATTT CGTCAACCAA GTTCAGCTAT GGTATTGTGC AAGCCCACTG AAGGCGGCGT 
TTGTTCGTCT TTCGGATAGC GTCATCAAGC GCCAGGTAGG TGTGATTGGA TCTTAAAGTT 
GCTGCCGTAG GGGTTGGGCA TCTACTGATC TTAATGTAGT GCTTGGACGA TATGTTCTAC 
CATGACATGA TGATCACGCT CCACCAGCCG TCATCCCTTC TCCCGCGCGT ATCTTCAGCT 
TATATCGACA CCCTTTACCA ATCTGCCTGT ATTTCACTAG ATCTATATGC CCATTATACA 
TCAGAAGATC ATGTAATCCG CCACTGGATC CATCTCCACA GAGTTTTCAA GACCTGTATT 
GTCTTGATTT ACTGCTGGAT TGAGCAGCGC TCTCAAGTGG AGTTGGAAGA GGCGACACTC 
GAAGATATAT TGAGGAGGGT CCATCTGTGT CAAGAAGTGC TTGGTCGATT CAGTGCGTGT 
CCACAGGCAG AGACTTTGGC TATGACATTC AACACCCTTG TATCTCCTTT CGTAGAAGGA 
GCAGGCGGTG CACAAAGCAT AGATCAGAAC TTGTTCATTA TGCATTGA 

 

Protein sequence

MSSLSSTSLE DARPSPPAYA PRAQACVRCH LRKRKCNRAL PRCGACERAN AECQVYNKNH 
DQGLIEEIRS LKNRIAWLED IVIKVDPQWA DIVTIPTGQA LPARGQYHPQ PPSVPPLSET 
DDQASFLCQS RQKSTISSIP NVFSHVVRHT PLNHCYPETF LYMTPLPLQT IDDHLRVDLS 
TFNSIQVTPA PETPFSTRVQ SLNILSFEDA IELVKRYTGD HKFSHQVTSF QQLEHDAKLV 
YSEEGLSNSD YYASRFRLFI VVYLSGILGY KKTDLTAWRR YRKMAMMEIP HILVHEDLTC 
VQALTLLASV AIYESDLNVW RILGMASHTA IAINLHRKDE IFLPPYLVTM DPPTVERFNE 
QRKNIFWTLY VLDRLVLSCF GYPPSIRDDD IDIDHPICPP TTGPSPSSEL CHAIIGRRLL 
GQIHESLYSP SVRPNENGEQ IVANFVNQVQ LWYCASPLKA AFVRLSDSVI KRQCLDDMFY 
HDMMITLHQP SSLLPRVSSA YIDTLYQSAC ISLDLYAHYT SEDHVIRHWI HLHRVFKTCI 
VLIYCWIEQR SQVELEEATL EDILRRVHLC QEVLGRFSAC PQAETLAMTF NTLVSPFVEG 
AGGAQSIDQN LFIMH