Gene CNM01880 details

Gene Information

• Locus tag: CNM01880
• ID: 3255136
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006682
• Strand: +
• Start bp: 572512
• End bp: 576290
• Gene Length: 3779 bp
• Protein Length: 1044 aa
• GC content: 49%
• IMG OID: 638254342
• Product: conserved hypothetical protein
• Protein accession: XP_568470
• Protein GI: 58262120

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GAAGGTTCAG ACTTTCAAAA ATCACTTGGA GAAGCCACAG CAAAGCCACA CGAGGCAATC 
GGTTTTTTCC CTGCCTCAAC TCGCCGGCTA ATGTGGTTAC GCACTTAATC TGTACTCTCT 
TTACTCACAT CGGATCTCTC TAAACAGTCA CTGGTGACAA CCCGCCATGT CTCTACCCCA 
ACGTCTACCC ATTCTTACTC CACCGAACCA TGGTCCACCC CCTCTTTCAT CACACCCCGC 
CTCTGCTCCA ATGCACCAAA GCCGAGGACA TCACCAGCAG GCAATGTACT TCCATTATCC 
CCAATCAGCG CATCCTTCCC AGTTTCATTA TGTCCCTCCG CCACTTGTAG CTCCCGTACT 
AGAGACTCGC CCTTCCAATA GCCATCATAC CAATGGTAAT AACGCTGATG GTGATACTCC 
ATGGCTTACC AGGGACTTTC CTCCGAACAG CCATATGCAC CACGCGGCTA GCCAGTCCCA 
GGCCGGAGGA CCTTCGCACC CGCATATCCC AAGACGCATG ACGTATCAGC CATCGCCATC 
GGATCCAATG GTCGAGTATG ATCAATGGAA ATCAAGCAGA CGAAATTCAC AGATCTCATC 
TGTGCCACCA CGCTATCTAG AGCATGAACC GCATGGATGC GAAAAGGAGC GGGGACATAA 
GAATGAATTC TCACAGCCAG AGTCTTCTGC TGCTGAATCA CAAATCAAGT GGCAAAAGAA 
GCGTCCTCGT ACTACATCGA TGTCCCAACA CGAATCGATA ATGAACACGA CACAGCAAAG 
CAAACCGCCT CAACAGAGTG AACAAGGTTC GAGTACGGCA GAGAAACTGG TCTATCCTGC 
TGTTCTGACT AGAGAAAAGA AGCAAAAAGC GTGTGGTAAC TGTCGAAAGG CAAAGTTAAA 
GTGCATGTTG GAGCCCGATG GGAATGTTTG CGTGAGATGC AAGGCGAGAA AAGAGAAATG 
CGCATTCTAT CCGAAAGGCC ATGTAGGTGT GCTAGATTCT GAACAGAGAG GAGTGTAGAC 
TGACTGTTAC TAGGACGAGG ATTGGCAGCA AACTCTTCAG TCCGATTTGT ACGCCGCCAC 
CAACCATTTA TCCCAACTGT CAGCTGCTGT GAACCACATG CTCAGCCATC TCGTCTCTCA 
AAATATCATA CCACCCTTTT CACCTCCTCT GAAACATTAT GAACATCCAG ACCGAGATGC 
TGTTCTTACC TATATGGAAA ACACGAAAAA GAACTCAATG ACGGAAGGGG GTTCTACGGA 
GGAAGGGACG AAGAAGAGTA AGAAAAGGAA GGGGTCAAAA TCAGAGGACT CAGCCGAGGA 
CGGCGGGAGT GTACCCTTGG CCAACAGCCC AGATGGGACG GACAAGCCCC AAAATTCGTC 
TTCATCAGAG ATAACAGTTC CGCAACCTAT GCAGTCCCAC CCAGAGCAGT CTTCGCATGA 
GCTCCCAGAT ACCCTCTTCC CATCCTATTC CCCATCTGAT ATTATTCCAA ACCAATCTCT 
TCCCTCTATC AGCAGTCAAA TGTTCAGCCC AACTTCTTCT TCCGCCAGAC TCGGACCTAC 
GCAACAGTCT TTCAGTTTGC CACCCCTCCA TTCTGACTGT ATGGCGACTG CTCAAGATCA 
AAGAGTCACG CCTACTTCCT TGCAGAACCA TAGCCCCACT TCTGGCATCT CGTCCTCGCC 
ACCTCAACCG ACTCTACCTC AGTCAGACGA TGCCCGTCAA ATCACCTCGT CTGTCCCTCC 
TGAGTATGCA GGAGTAACAC ATGCACCTAC TCAGGAAGAG TACGGACCAC AATCCCAGGG 
TGGTGGTTAT GCACAGTCGG GTACACAGAG ACATTTGACT TCTTCTTTAC GCGATGAGCC 
GATAAAAGGT CAATATGAAG TGGAGGGGGA GTATGAAGAT GAGAATGGGA TGGAAATTGT 
TCTTGGATCG AAAGATCCTA GACAAGATAT TATCAAAAAG AATATCGTGA AGAACAAGGA 
TGCTTTGATA CTCGTTAATT AGTAAATACC CCTCTTTTCT CACAAAATTT ACTGGAAGCT 
AACAGCCATC TCAAGTTTCC ACGGCCATCT GAGCAGTTTC CTCTATGGCT ACCGCCTCCA 
ATTCCGTAAA TTCCCATACC TCGAAGGCGG CCCATCAACT ATCACCCCGC TCATCCTCGC 
TGTCCTTTGC CTCATCTCCT CTGAGCGATT CGCGATCCAT CAACATTACC GTCTCCCTCT 
CATCGACGAA GTCCAAGCTC TACTAGGTAC TTCACCCGCA GAGAGCTGGC AGAGTTTTGA 
AGGGGATCAG TCGAAAGGGT TTGGGGATGT GGAGGCAGAT GATCCGTTAG ATGCCGAATT 
TGGACTGGGA CCAGAGGAGA TTGTGGCGGC GTGTGTGTTG GCGACGTATA TGGTGGATAG 
GAGGGAAGGG GCGCTGATTG CAAGGTTCGC GTTCAGATGG GCAAGGGGTT GGATCAGGGT 
GAGATTGTTT TTCTTTTGTT GTTCGGCCGA GATCTGATGG GAAGAGCTTC AGTTGTTGTC 
GTCGACGCCT CCAAGGGTGA CGTTGGCTGA GACAGCAGGT TTTGTACCTC CTGAAAGACA 
AGCTACAGCA CAGGATATGG CCAGAGTCTG GCTTTTATGC TACGCAAGTA TCATTTCACT 
GTGTATGGTG CGACTTTGTC TAATTTGTTA TTTTATTTTA TTTTCAGATT GTCGACAGCA 
CCGAGCGTCT TCAGTTTACC GATATCCCCG CTCCACTCTC ACGTGATGCG TTATCCTACT 
GCAACCTCCT TATCCCCCCA TCAACCTCTT ATCAATCCCC CTTCTTCTCC CCTGGCTCTC 
CTCCCCGTCC TGAAGACGCC CCAGACCCAC ACGATATCCT TCTCACCTCT CACGCCAGAC 
TCATGACCAT CCTAAACGAA TGGAGACACC GCCTCGAACA AATCGACGTA CCCGGTGCGA 
ACCGCCAAGT GTATGTGGCG CAGTTGAAGA GGTTGGCGGG GAAAGTGAAT GGGGAGTTGG 
AGTGGTGGAA TGCGGGGTAT CAAGCGACGA AACCGTCGTA TGTAAACGGT AATAATGGTG 
AAGAAGGAAT AGGGGAAGGG AAGGGGTTAC GATGGAGATA TACGGAAATG ACGTGGCTGT 
TCGTCAAGAT GCTTGTCAAC TCTACCGTGT CTAAAGCCCT TTCCCCTTCT CCTGCCGTCG 
CTCCTCATAC TCGGCCACTC GTCCCTTCTG TTACATCTAC ATCCGCTTCG AATAATTCTA 
CAACACTCTC AACCTCCGAC TCTAAACTGC GCGAAGCCTC CATAGCGCTA GTGGTAGACT 
GTGCACTCGA GATTCTGGAG ATGTGTGCGA GGTGGGTGCC GAGAGAGGAG ATTACAAACT 
TTGGTCCGAC GTATTTGTAT TTCATAACGC TCGCGGGGAG CGAGCTGGTT TCTGCATTGG 
GTGATGGTGG AGGCGAAGGC GTTGTGTCGA TTGATGAACG TAATTTCACC TTTTTTTAAT 
ACTTTCATGA CAAAAAGGGA ATATTGCTAA TGGCGACTAG TGATAACTTT GTTTAGGACC 
GTTGGAGAAG CCCTTTTCAT GGGAGAGCTG CATGAGCAGC ACGTAACGAG GATGACGGGA 
AAATCATTGT TCTACAACTG TGATCAACTG GGCATGATGA AGTCTTGGAG ACAGTAGTTA 
CAAAATATGA GAGGGATATG AGCCCCAGAT CTTTGCTGTG GCTGTATATC ATGGTTCCTT 
CTTATCGCAG ATAATTGTAA TCATTTTATG TACTTGGTTG GCAAGCATGT TCATAATGT 

 

Protein sequence

MSLPQRLPIL TPPNHGPPPL SSHPASAPMH QSRGHHQQAM YFHYPQSAHP SQFHYVPPPL 
VAPVLETRPS NSHHTNGNNA DGDTPWLTRD FPPNSHMHHA ASQSQAGGPS HPHIPRRMTY 
QPSPSDPMVE YDQWKSSRRN SQISSVPPRY LEHEPHGCEK ERGHKNEFSQ PESSAAESQI 
KWQKKRPRTT SMSQHESIMN TTQQSKPPQQ SEQGSSTAEK LVYPAVLTRE KKQKACGNCR 
KAKLKCMLEP DGNVCVRCKA RKEKCAFYPK GHDEDWQQTL QSDLYAATNH LSQLSAAVNH 
MLSHLVSQNI IPPFSPPLKH YEHPDRDAVL TYMENTKKNS MTEGGSTEEG TKKSKKRKGS 
KSEDSAEDGG SVPLANSPDG TDKPQNSSSS EITVPQPMQS HPEQSSHELP DTLFPSYSPS 
DIIPNQSLPS ISSQMFSPTS SSARLGPTQQ SFSLPPLHSD CMATAQDQRV TPTSLQNHSP 
TSGISSSPPQ PTLPQSDDAR QITSSVPPEY AGVTHAPTQE EYGPQSQGGG YAQSGTQRHL 
TSSLRDEPIK GQYEVEGEYE DENGMEIVLG SKDPRQDIIK KNIVKNKDAL ILVNYFHGHL 
SSFLYGYRLQ FRKFPYLEGG PSTITPLILA VLCLISSERF AIHQHYRLPL IDEVQALLGT 
SPAESWQSFE GDQSKGFGDV EADDPLDAEF GLGPEEIVAA CVLATYMMGK GLDQGEIVFL 
LLFGRDLMGR ASVVVVDASK GDIVDSTERL QFTDIPAPLS RDALSYCNLL IPPSTSYQSP 
FFSPGSPPRP EDAPDPHDIL LTSHARLMTI LNEWRHRLEQ IDVPGANRQV YVAQLKRLAG 
KVNGELEWWN AGYQATKPSY VNGNNGEEGI GEGKGLRWRY TEMTWLFVKM LVNSTVSKAL 
SPSPAVAPHT RPLVPSVTST SASNNSTTLS TSDSKLREAS IALVVDCALE ILEMCARWVP 
REEITNFGPT YLYFITLAGS ELVSALGDGG GEGVVSIDEL ITLFRTVGEA LFMGELHEQH 
VTRMTGKSLF YNCDQLGMMK SWRQ