Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNM01380 |
Symbol | |
ID | 3255200 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006682 |
Strand | + |
Start bp | 405098 |
End bp | 407019 |
Gene Length | 1922 bp |
Protein Length | 407 aa |
Translation table | |
GC content | 52% |
IMG OID | 638254290 |
Product | expressed protein |
Protein accession | XP_568439 |
Protein GI | 58262058 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.576084 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATTCTTTATT ATACGTACAC GCCTTCTTTT CCCATTTCCC TTTCTTTTTC TTGTTGTAAC ATTAGTACCC CGCCACGTCA TCGCACCTAT TTCCACTCTC GCAATGGCTA CCGCTGTCGC TTCCCCTTCC TTACTCTCCC CTATTCCTTC TACTTCCAAA CGCTCTGCCC CTTCTCCTTC ATCATCACAA CCTGTCAAGC GTCCTCGTCA ATCTAGTTCA TCATCCAAGG ATGAGGACGA GGTAGCCGCA AGTGATGAAG AGCTGGATGA AGAAACTCGT GCAAAGCTGG CCCGCAAAGA AGCTAGAGTG AGTATTCTTC CTTTGTCAAT CGATGGGACG CGTTTTAACT CTCCTAATGT AGACCATCCG TAATCGCGAA TCAGCTCAAA GATCGCGTAA CGCCCGCAAA GCCCATGTTG CATGGCTAGA GAAGCGCGTA GTCGAGTTGG AGGCAGAAAA TCGCTCTCTG AAAGGAGAGC CACCAACGTC GACGGATCCG GTTCCGACTG CGGCTACGCC CGAGCCCGCC GCACAGCCTC CTGCGCGAGA AGCTTCCACA GAGCACGACG TATTGTCCTT CGCCAACGAC CTTGGTATCC CAGCAGAAGT TGTCAGCAGT GGTGTAAGCT TGTCGAACGT CGCGCCTCCT CCATCGAGCG TAGATGTAGA CGTCAAGCCC ATCATCGAGC CTTCACCTCT CACACTCGCA TCGCCTGCTG TGGTGTTGAC CTCGAATGAC GACCTAATGG CAATCAAGAC GGAGAACGCA AACCTGAGGC AAAGAGTAAC ATTGCTGGAG AACCTCGTTA AGCAGGTCGT GGCCATTGCC AATTTCAGCC CGCCTGTCCC TTCTACATCT CAACGAACCC CAGTCAACCA GTTTGCATCA TTACCTGCGC AATCGTCTCT TGATTGGTCG TCAACGCTCT CGGCGACATC CATTCTGCCT GCTGGTCTTT CTTCTACCCT TTCGCCTGGC CTTCCTGCCC GTAACTCTAC TGTCTCCACC ACCTCGGCTT CTCAGCTTCC ACACCTTGCC CAGACCTCTC AACCGGAGCT GGCGTCTTCC CGAAATGTAT CGAACTCCGT CGCTTGCCAC TCAGCAGTAG TGGCGACTAC ATCAGCACCT CTTATCAAAG GGAGGCTTGG TGTGGCCCTG CAGCGGGCGA GGGGGAATTA TTCGATGCAC TCTTTGGCGT TGGCGTTGGC GAAGGACGAG AAGCGGATGG CGCAGGTAGC GAGGTTAATC ATCGCCTTGG CGAGACACAA GGGCTGGATA TCTCACCCTC AACAATCCAA TCAGTCCCTG AACATGGCGT GGAAGGGATG CTTGGAAGGG AGGAAATGCA GGCAGCGGTC GAGAGTTGGG ATGAGGCGAT GAAGGCGTTG ATTGAGGATC TTGAGGGAGG GCAGAAGGAG GAGAAGGCCG GTGACAGAGA GGAAGAGCTG AAAGGGATGG AATGGTTGAA CGTTGAGAGG GGTATTATGG CTTGAAGAAG AAACAAAATA ACACTTTTCT ACGTACACAC CAAATTTACA TACATATAGC TGTCGACCAT CGGCCACGAC ATTCGTCCTG CCATCAAACC GACCAATTCC GACTTCCTTT GGTGTTTCAA TCCTCATTTT CCGTGGCCCA TTCTAGGGAA CCACTATTAC CGCAGCTCGC CGACCCCTAT TTCTCCGTAA TTTTCACCCG CTCCCGAAAG GTTTGAGCCG TGATCACGTG AGTGGGGAAC GAAGCTGTAT CGATAATGTG TTTCCAAGTG AGGGTTTTCA GGAGGGTGTC GAGAGAGTGC TGAAGGGACG GGGAACTGCA AGGGGCGAGA GTAGTTCAAT GCTGTCGGTT CGCGTAGCGA TGCTTTTTTT GTATCAACAT TCACCTAGAT AGATTGAAGT GAAATGTATA TACTTGATTC TT
|
Protein sequence | MATAVASPSL LSPIPSTSKR SAPSPSSSQP VKRPRQSSSS SKDEDEVAAS DEELDEETRA KLARKEARTI RNRESAQRSR NARKAHVAWL EKRVVELEAE NRSLKGEPPT STDPVPTAAT PEPAAQPPAR EASTEHDVLS FANDLGIPAE VVSSGVSLSN VAPPPSSVDV DVKPIIEPSP LTLASPAVVL TSNDDLMAIK TENANLRQRV TLLENLVKQV VAIANFSPPV PSTSQRTPVN QFASLPAQSS LDWSSTLSAT SILPAGLSST LSPGLPARNS TVSTTSASQL PHLAQTSQPE LASSRNVSNS VACHSAVVAT TSAPLIKGRL GVALQRARGN YSMHSLALAL AKDEKRMAQV ARLIIALARH KGWISHPQQS NQSLNMAWKG CLEGRKCRQR SRVGMRR
|
| |