Gene CNM01380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNM01380 
Symbol 
ID3255200 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006682 
Strand
Start bp405098 
End bp407019 
Gene Length1922 bp 
Protein Length407 aa 
Translation table 
GC content52% 
IMG OID638254290 
Productexpressed protein 
Protein accessionXP_568439 
Protein GI58262058 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.576084 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATTCTTTATT ATACGTACAC GCCTTCTTTT CCCATTTCCC TTTCTTTTTC TTGTTGTAAC 
ATTAGTACCC CGCCACGTCA TCGCACCTAT TTCCACTCTC GCAATGGCTA CCGCTGTCGC
TTCCCCTTCC TTACTCTCCC CTATTCCTTC TACTTCCAAA CGCTCTGCCC CTTCTCCTTC
ATCATCACAA CCTGTCAAGC GTCCTCGTCA ATCTAGTTCA TCATCCAAGG ATGAGGACGA
GGTAGCCGCA AGTGATGAAG AGCTGGATGA AGAAACTCGT GCAAAGCTGG CCCGCAAAGA
AGCTAGAGTG AGTATTCTTC CTTTGTCAAT CGATGGGACG CGTTTTAACT CTCCTAATGT
AGACCATCCG TAATCGCGAA TCAGCTCAAA GATCGCGTAA CGCCCGCAAA GCCCATGTTG
CATGGCTAGA GAAGCGCGTA GTCGAGTTGG AGGCAGAAAA TCGCTCTCTG AAAGGAGAGC
CACCAACGTC GACGGATCCG GTTCCGACTG CGGCTACGCC CGAGCCCGCC GCACAGCCTC
CTGCGCGAGA AGCTTCCACA GAGCACGACG TATTGTCCTT CGCCAACGAC CTTGGTATCC
CAGCAGAAGT TGTCAGCAGT GGTGTAAGCT TGTCGAACGT CGCGCCTCCT CCATCGAGCG
TAGATGTAGA CGTCAAGCCC ATCATCGAGC CTTCACCTCT CACACTCGCA TCGCCTGCTG
TGGTGTTGAC CTCGAATGAC GACCTAATGG CAATCAAGAC GGAGAACGCA AACCTGAGGC
AAAGAGTAAC ATTGCTGGAG AACCTCGTTA AGCAGGTCGT GGCCATTGCC AATTTCAGCC
CGCCTGTCCC TTCTACATCT CAACGAACCC CAGTCAACCA GTTTGCATCA TTACCTGCGC
AATCGTCTCT TGATTGGTCG TCAACGCTCT CGGCGACATC CATTCTGCCT GCTGGTCTTT
CTTCTACCCT TTCGCCTGGC CTTCCTGCCC GTAACTCTAC TGTCTCCACC ACCTCGGCTT
CTCAGCTTCC ACACCTTGCC CAGACCTCTC AACCGGAGCT GGCGTCTTCC CGAAATGTAT
CGAACTCCGT CGCTTGCCAC TCAGCAGTAG TGGCGACTAC ATCAGCACCT CTTATCAAAG
GGAGGCTTGG TGTGGCCCTG CAGCGGGCGA GGGGGAATTA TTCGATGCAC TCTTTGGCGT
TGGCGTTGGC GAAGGACGAG AAGCGGATGG CGCAGGTAGC GAGGTTAATC ATCGCCTTGG
CGAGACACAA GGGCTGGATA TCTCACCCTC AACAATCCAA TCAGTCCCTG AACATGGCGT
GGAAGGGATG CTTGGAAGGG AGGAAATGCA GGCAGCGGTC GAGAGTTGGG ATGAGGCGAT
GAAGGCGTTG ATTGAGGATC TTGAGGGAGG GCAGAAGGAG GAGAAGGCCG GTGACAGAGA
GGAAGAGCTG AAAGGGATGG AATGGTTGAA CGTTGAGAGG GGTATTATGG CTTGAAGAAG
AAACAAAATA ACACTTTTCT ACGTACACAC CAAATTTACA TACATATAGC TGTCGACCAT
CGGCCACGAC ATTCGTCCTG CCATCAAACC GACCAATTCC GACTTCCTTT GGTGTTTCAA
TCCTCATTTT CCGTGGCCCA TTCTAGGGAA CCACTATTAC CGCAGCTCGC CGACCCCTAT
TTCTCCGTAA TTTTCACCCG CTCCCGAAAG GTTTGAGCCG TGATCACGTG AGTGGGGAAC
GAAGCTGTAT CGATAATGTG TTTCCAAGTG AGGGTTTTCA GGAGGGTGTC GAGAGAGTGC
TGAAGGGACG GGGAACTGCA AGGGGCGAGA GTAGTTCAAT GCTGTCGGTT CGCGTAGCGA
TGCTTTTTTT GTATCAACAT TCACCTAGAT AGATTGAAGT GAAATGTATA TACTTGATTC
TT
 
Protein sequence
MATAVASPSL LSPIPSTSKR SAPSPSSSQP VKRPRQSSSS SKDEDEVAAS DEELDEETRA 
KLARKEARTI RNRESAQRSR NARKAHVAWL EKRVVELEAE NRSLKGEPPT STDPVPTAAT
PEPAAQPPAR EASTEHDVLS FANDLGIPAE VVSSGVSLSN VAPPPSSVDV DVKPIIEPSP
LTLASPAVVL TSNDDLMAIK TENANLRQRV TLLENLVKQV VAIANFSPPV PSTSQRTPVN
QFASLPAQSS LDWSSTLSAT SILPAGLSST LSPGLPARNS TVSTTSASQL PHLAQTSQPE
LASSRNVSNS VACHSAVVAT TSAPLIKGRL GVALQRARGN YSMHSLALAL AKDEKRMAQV
ARLIIALARH KGWISHPQQS NQSLNMAWKG CLEGRKCRQR SRVGMRR