| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNM01000 |
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| Symbol | |
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| ID | 3255235 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006682 |
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| Strand | - |
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| Start bp | 299740 |
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| End bp | 303224 |
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| Gene Length | 3485 bp |
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| Protein Length | 1003 aa |
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| Translation table | |
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| GC content | 49% |
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| IMG OID | 638254251 |
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| Product | ER to Golgi transport-related protein, putative |
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| Protein accession | XP_568412 |
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| Protein GI | 58262004 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5028] Vesicle coat complex COPII, subunit SEC24/subunit SFB2/subunit SFB3 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.779666 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | AACGAATTGA CATGGCGCCT CGCACAAGAT ACGCCATAGA TCCTTCGTTG ACGGGCCACC
CACAGGTCCC AGCGCCTCAG CAGCAACAAT GGCCGCAACC AGAGTACATT CAAGCAGCTC
AGCCGGGCTA TCAGCCTGAA AGGTACCAGC AGCAGGCGCA CTTGGACCCA AATTCGATGC
CTCAATTGCA TAATGTCCCC GAAAAAGATC TTCGACCAAG TGGACCATAT GCTCCTACGC
AGTCCAGTTA TCACGCGATA CATCCTTCAC AACAGTTACA GCCGAAACAG CAGCAACAAG
AAATGCAGTC GCCGAGGGCT ACTCCACCTC CAAACCATAT TCCACCGCCA CCTCATTCTT
CCGGACCCAC TATGAGCGGG ATGAGGGTTA GAATAGATCC GAGTCAAGTG CCAAACCCTA
TTGAAGCTCA GGAGCTGGAT CAAAACTTGT ACGAGGACGA GGATTTTTTA AGTTGTCAAA
CCCGTGGTCT GATTCCATTG GTAGGGACTG ATTACAGGGG CGTGGACCAA GGTATGCTTG
TATCTTCTAG CGCAAAGGTA TATCAATTAA TGTCGACTCC TAGGCAATTC ATTGCCTCGT
CATCTTCGAG CTACGCTTCC ATGCGTTCCG TCAAATGGTC AGCTTCTCGA CACTACCGCG
CTTCCTTTCG GTATCCTGGT TCAACCTTTT GCACCGTTAC GGTACGACGA AGCTCCTGTT
CCATGCGTTT CCAGTTGGGT TTCAGGGCAA AGCGCTTTCG ATCCCCCAGC ATTTAAGGGT
GAAACATGGG GAGCGGAGGG GGAAGGAGAT GAACAAGGCC CGCCGAGGTG TGACAAATGC
AGAGGGTACA TCAACCCATG GATTAGATTT GTCGATGGTG GAAGAAAGTG GACGTGTAAC
TTATGTGGAG TTCTCAATGA GGGTACATCG TCGTTCATTC ACCGTTTTGG TTCACATCTG
ACGATTTTGC AGTGCCGCCG CAGTACTTTT GCCATCTCGC TCCCAATGGC CAACGTCTTG
ATCATGCTGA AAGGCCGGAA CTTCAATTTG GCACTGTTGA CTTTCCTGTA CCTCCTTCGT
ACTGGGCTCT GCAACCTCCT TCTGGGTCTT TACTCGACTC CATTGACTCG GACGCGCTCG
CTTCGACAGC GCACGATCTT TTGGGTGGCC TGCAAGCGTC TCTTGGACAA AGTCAACCCC
ATATTCCTAC TGGAAAAGAA CAGAGAGAAA AAGAAAAGGA AAAGGAAAAG GAGAGAAAGA
AATTCAGAAA ACCTATCGCG TTGAGTCGTG TTTTTGTCCT TGATGTCAGC GCACATGCGG
GAGAAAATGG AGTTGCCAGA CAAGTTTGTG AGAGGATCAG AAAGGCTATC TACGGAAGCA
AAGAAAGCGG GAATGTGGAA GAGGAGCTGC TGGGAGAAGG ACAACGAATT GGATTCGTGT
CTGTGGGAGA AACTGTATCT TTCTGGAACC TTTCCGTAAG TCTATCGTGT CTCCAAGTCC
GCCAGACGCT GATTACATGG TAGTCTCATC TGCATGCGCC ATCACAGGCA GTCGTTTCAG
ATCTCGATGA CATGTTTATA CCTTTTACCG CTGGCTTCCT CGTTGATCCG CAAGAATCCC
GCGCGCAAAT TGAACATCTA TTGGAACTTT TGCCGAACTT GGCGGAGCAA GGAAGAGAGG
GTGGGAGGGT CGCCGCGGGC TCTGCTATTG TTGGAGCTTT GGCTGGTCTT GTAAGTGAAT
GTTCACATAA ATTAGGACAA CACAACGATC GCTAAATGAT CTTTGTAGAA GCACACCGGT
GGCCAGATCA ATCTCTTCCT CACGTCTTTG ACCACACATG GTCTTGGTAC CCTTACGACA
CGAGAGAATC CCGATTATTA CAACACCGAC AAAGAACGGA CACTCTTCAC CCCTTCACAA
TGGTATCTCA CCACGGCCGA CCAACTTGCC GAAGCAGGTG TCGGCGTTAA TCTCTTCTTG
TTCCCCAGCG CTTATACCGA TATTGCCAGT CTTGGTGCCC TCGCTGCTGG AACGGGAGGT
GAGACATTTT TCCACCCCAG GTTTGATGTA GTCAGAGACA GGGAAAAGAT TCATAGCGAA
CTTCTTCAGG TGCTCACTCG GGAGACGGCT TACAATGCTA CTGTGCGAGT GAGATGTTCT
AACGGTCTTC GCGTCTCTGA CCACCTGGGT AATTTCTATC AACGTTCGCT CACCGACTTG
GAATACGCTA CGATTGACTC TGCCAAATCG TTCACCGCTG TGCTCAAACA CGAACATCGA
CTAGACGACC GGCAACCTGC GTTCATCCAA GTTGCCATCC TTTACACTAG TAAAGAAGGA
GAACGAAGGG TTCGATGTTT GAATATGAGC TTTGTGGTTA CAAGCATGAT TGGCAATGTG
TTCAAATTTG CCGACCAGGA AGCGTGTGTA GCTGTCCTTC TCAAAGCTGG GTTATCACAG
GTTACGCAGA GAAGCTTGAG AGATATCCGG AAATCTTTGA CGGATAGGGC GAACAGAGTG
TTACTCATGT ACAGAAAGCA CTGCGCACCT GCTGTCCAGC ACGGCCAGGT GAGTCAACGC
ACCTTGTTTA AAGCCCTATC TGTACTAATA TTTCCCTAGC TCATATTACC GGAAGGTTTC
AAGCTCCTGC CCCTATACGC ACTTTGTATG ACCAAGTCGA AACCCATCAA AGGTGCGTTT
GCTACCTGTG TGGACTCGAT CAGATATCTG ACTATTGTCT AGGTGGAAGC GTCTCCTCTG
ATGTTCGAAT GCATTACACT CGCCACGTCA AAGCTCTCCC ACCAACCCGT GTCCTCATGC
TCCTCTATCC CCGATTGTTG GCTATCCACG ACCTTGCACC CGCTGCCGGC TTTGCCGACT
CTAACACTGG GCGTCTAGTA TTACCTCGCT TTATGCGCAA CAGCCATAGT TGGATGGTAG
CGGAAGGCGC TTATCTAATG ATTAACGGAG AAATTGCGAT GCTCTGGCTC GGCCAAGCCG
TCAGTCCCCA GATCATCAAT GATCTTTACG GTGTAGACAA TCTTGAGGAC CTCGACGTCC
GCATAACCCG ATTACCCAAC TTGCCGACCC TTCTGTCTAC TCAAATCCGG AACATCCTCA
CACATCTTTC ATCCCCTCAC CTTGTCGATC AGGAGTTGCC GGTCATAATT GTTAGGCAAA
ATATGGATGG GGCCGAAGTG GAGTTTGCCA ATCAGCTAGT TGAGGATAGC AACAATGATG
CTCTAAGTTA CACTGACTGT ACGTTTGCAT ATTTTCGGAT AAATTTCGAC TGCCATGATT
GATGCTTATG ATTATCCTCT AGATTTAATG ACGGCGCACA GGGAGATCAC AAACGATCTC
AGCGGCGGAA AGGGCGACAG CTGGAGACCG TGGTAATGGG TGAATACCGC TAAGATCAGT
TCTACGATTC AAGAACATAG AGGGACAAGT CAACAAAAGA CATAAGGTAT AGCGTTGATA
CTGGT
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| Protein sequence | MAPRTRYAID PSLTGHPQVP APQQQQWPQP EYIQAAQPGY QPERYQQQAH LDPNSMPQLH
NVPEKDLRPS GPYAPTQSSY HAIHPSQQLQ PKQQQQEMQS PRATPPPNHI PPPPHSSGPT
MSGMRVRIDP SQVPNPIEAQ ELDQNLYEDE DFLSCQTRGL IPLVGTDYRG VDQGNSLPRH
LRATLPCVPS NGQLLDTTAL PFGILVQPFA PLRYDEAPVP CVSSWVSGQS AFDPPAFKGE
TWGAEGEGDE QGPPRCDKCR GYINPWIRFV DGGRKWTCNL CGVLNEVPPQ YFCHLAPNGQ
RLDHAERPEL QFGTVDFPVP PSYWALQPPS GSLLDSIDSD ALASTAHDLL GGLQASLGQS
QPHIPTGKEQ REKEKEKEKE RKKFRKPIAL SRVFVLDVSA HAGENGVARQ VCERIRKAIY
GSKESGNVEE ELLGEGQRIG FVSVGETVSF WNLSSHLHAP SQAVVSDLDD MFIPFTAGFL
VDPQESRAQI EHLLELLPNL AEQGREGGRV AAGSAIVGAL AGLKHTGGQI NLFLTSLTTH
GLGTLTTREN PDYYNTDKER TLFTPSQWYL TTADQLAEAG VGVNLFLFPS AYTDIASLGA
LAAGTGGETF FHPRFDVVRD REKIHSELLQ VLTRETAYNA TVRVRCSNGL RVSDHLGNFY
QRSLTDLEYA TIDSAKSFTA VLKHEHRLDD RQPAFIQVAI LYTSKEGERR VRCLNMSFVV
TSMIGNVFKF ADQEACVAVL LKAGLSQVTQ RSLRDIRKSL TDRANRVLLM YRKHCAPAVQ
HGQLILPEGF KLLPLYALCM TKSKPIKGGS VSSDVRMHYT RHVKALPPTR VLMLLYPRLL
AIHDLAPAAG FADSNTGRLV LPRFMRNSHS WMVAEGAYLM INGEIAMLWL GQAVSPQIIN
DLYGVDNLED LDVRITRLPN LPTLLSTQIR NILTHLSSPH LVDQELPVII VRQNMDGAEV
EFANQLVEDS NNDALSYTDY LMTAHREITN DLSGGKGDSW RPW
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