Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNM00470 |
Symbol | |
ID | 3255246 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006682 |
Strand | - |
Start bp | 117222 |
End bp | 119107 |
Gene Length | 1886 bp |
Protein Length | 346 aa |
Translation table | |
GC content | 48% |
IMG OID | 638254206 |
Product | conserved hypothetical protein |
Protein accession | XP_568357 |
Protein GI | 58261894 |
COG category | [R] General function prediction only |
COG ID | [COG1064] Zn-dependent alcohol dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TCGCCCAATG CCGGTTGCCC GGGCCCCAAT GACACTGATA TAAATGATGG AGGCCGCACC TGCTTTCTAA CCCGCCACAT CTTCTACTCT CCCATAGGTC AGCCCATCAA CCATCTGAAA CGAAAATCAA TGAAAGCAGC TCAAATCGTG GGATTTGAAG CCCCTTACAA GGTCACCGAC ATACCAAAGC CAGTCCCTCA AGGCAATCAG ATTCTGCTTC GCGTCAAGGC AGCCGGCTTC TGCCACACAG TATGTCGTTC ATCTGCCTTA TCTTGCCTCG AGTGCCAACT AGATGGTCAG GATGAAGCTG TCAAAATGGG CTACACTGGC TCCCCCCTAC CCCTCACAGG TGGCCATGAA GGAGCTGGCC TAGTTGAGGC TACGGGGGGA GATGTTACAA ACTTTACCGT AGGAGACAGA GTCGCGGCTC TCCTCTTTAG GGAGCCCTGT GGTGAGTTTT TGTCTCTTTA GTTTGGAATG TCAATCAATA ATACGCGCAG GGGGGTGTGG AGAGTGCAAG AACAACAGCG CCGTGTTCTG TGATAACATT AAAATGAACG GATTGTAAAG TACTTTGACA AGTGTTTCCT AGACGGAATG CTGAGGACTT TGCCAACACA TTAGCAATGT TGATGGCGCC TTTGCGGAGT ACATGATTGT TGACCAACGT TTCACACTAC ATGTCCCGGA AAATATCGAC TTTGCTCAGG CTGCAGCTTT TATGTGCTCT GGGGCTACGT CAGTAACTTT CACCCTTGAT CGGTAAAGCC AGCACCTAAC TCCACCCCTT CAGAGTGTAC AATGGGTGGG GCTATTTGCG ACATCCTGCA GAACGAAGAG ACTGAAATCG CACAGGTTGA AAGCTGCCAA ACTCCCCCCG AAATCGGTAG TGGGCATCTA CGGAATAGGT GCACTGGGTA GTCTTGGTGT TCAATTCGCC AAAGCCATGG CACGTCTTCC GATTCGCTGT CTAAATGACC TCCGGAAGCG TATTGACTAT GAATGAAAGG GCCACCAAGT CATTGCGATC GACAATCGCC CTCAACCACT TGAACATATC AGAGCACTTG GCTCTCTGTC CCCTGATCTC ACCCTTTCCT CTGATCACAC TGTTGAGGAG GGTCTCAAGG CGATCGAAGA AATGTTCCCT GAGAAACTAT TGAGAGGCGT GGATGCAATG CTGGTGACTG GTGAGACTTG GCAAAGCCAA CTTCGCTGAA CTTTATGCTG ACAGTATGAC AGGCCCCCAA GCGCATGAGT TTGATTATGC ATTCAAGATG ACAGCAAAAC ATGGCGTTGT TGTAGCTTTG AGCTGCTGCA ACCAGCCTGT AAGTAACACG CAAGCATCTC TTTTCTTTCC ACAGGTCCTA TGCTGAAAGA CCTTTTAGAT GATTGAAATT GATTGGAAAG ACATTGTCTT GCGGGATATA CGGGTCGTAG GTGGATTCTG CGCTACTATA GAAGTTACCA AGGAGCTCCT TGAGCTAGCG TCAATGAAAA ACGTGAAAAG CAAGATTAGG ACATTTTCAC TCGATGAAGT AAACGATTTG CTCACCGTTT ATCACCAGGT AAGTTGCTGG AGAATAATCC TGTGCGTTGT TAATTTAGGT GTAGCCGGAT ATGCATGGGA AACTGGTTGT AACATTTGAC TGAGGTGGTA GAAAAGAGAG AAAGCGGTAA CATTTGATTG ATATGGTGGA CGAGGAAGAA ATTAGATGAA GACGATCGTT GTACAAATGT CCTGGCATAG AAACGTGAGG TGTTTGGCGT TTGTGGCAGA GAAGAATTAT GTGATTAGTG ACAGACAGCT CCGGCTCTTC CTTTCTGCCT CCCTTGTTTG TCAACGAAAG AATACATGCA CGGCATAATA ATGGGTAGAT AAGATG
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Protein sequence | MKAAQIVGFE APYKVTDIPK PVPQGNQILL RVKAAGFCHT DEAVKMGYTG SPLPLTGGHE GAGLVEATGG DVTNFTVGDR VAALLFREPC GGCGECKNNS AVFCDNIKMN GFNVDGAFAE YMIVDQRFTL HVPENIDFAQ AAAFMCSGAT VYNGLKAAKL PPKSVVGIYG IGALGSLGVQ FAKAMGHQVI AIDNRPQPLE HIRALGSLSP DLTLSSDHTV EEGLKAIEEM FPEKLLRGVD AMLVTGPQAH EFDYAFKMTA KHGVVVALSC CNQPMIEIDW KDIVLRDIRV VGGFCATIEV TKELLELASM KNVKSKIRTF SLDEVNDLLT VYHQPDMHGK LVVTFD
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