Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNL06800 |
Symbol | |
ID | 3254852 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006681 |
Strand | + |
Start bp | 891170 |
End bp | 894251 |
Gene Length | 3082 bp |
Protein Length | 889 aa |
Translation table | |
GC content | 49% |
IMG OID | 638254157 |
Product | mitotic chromosome condensation-related protein, putative |
Protein accession | XP_568197 |
Protein GI | 58261574 |
COG category | [B] Chromatin structure and dynamics [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG5229] Chromosome condensation complex Condensin, subunit H |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GCAGCACCAA CAGTATACAA TGGCTGTACT CCACAGTAAG CGCCCTCGTA TGCCAGCCAA CTCTCAAGGC ATCCATCAAC AAACATGCAT CAACGACGAC GCAGCAGAAA AGGCAAAGCG GCGCAAATCG GCGCATTTCC ATACTGTCCC AGACCATACC AGTATCAGCA ACGAGAACGA GAACCCAAAG AACCAAGCCG GGAAGAGGGT AATATCTGGG CTTGCTATCC AGCAACAAGG ATTGATCCAA AAGCGCGGGA AGAGGTTGTC TGCGGTGGAA CCCAATATGC CGGAAGTTCG AATCGAGGTC AAGGAGAACA AGTACGAGGA ATGGATGAAG CTTGCAACTG ATAATGTGTA TTAGATCCAT ATCATGTATC CTGCAAGAAC TGACTTTAAT TTTTTACTAG AAAATAACTG CCAACAATAC GTGGAGTTTT GCCCTTATCG ACTACTTTGC CGATCTCACC CTTCTCCGAA ATGGCCCTGA TGATCAGAGT ATTAACTTTC AGAAAGCGAG TTGCACATTG GATGGGTGTG TGAAGATATG GACATCCAGA GTGGATAGTG TGGCCACAGA AACGGGGAAG TTGTTGAGCG GTTTGGCGGG AGGCAGTGGT AAGCTTGACT TTCCTATATC TTCTAAAGCG AGATGAGTCT GATGATGACC GGCAGCTGAG ACAGGGGAGG ATGATGGTTC AGAAGGCGAG GAGGATGAGG CCGGAGAGCC AAAAACAACT AGAAAGGTAA ATTTCTTCAA TCCTGCTGCA GAAAACCCAA CAATAACGCA TTCCAGACCG TCCGTTCTGA AGCTACTCTT GCAAAGTCGT TCGCCCAGCT TCAAATTAAA AAGTTCGATC TCGAATTCAC CGTCGATCCG CTCTTCAAAA AGACTTCCGC GGATTTTGAC GAAGGTGGTG CGATGGGCTT GCTGATGAAC CATTTAAGTG TGGATAACAA ATTGAGGGAA GTGTTTGATG CCGGTGATGC GGTGGCAGAT GAACAGGATC TGGATGAGGA AAAAGAAGAG GGGGGTGGAG GGATGATTGA TGAGGTTGTG CAGCTGGAAA AATTACGAAG TGAGCCGCCT CTCTTTTTTC TATATGCTCC TTCAGCTTCT ATCAAACGAG AGCTGACGAG GGTTACTGAA GATTACATTC CTATCACCAA ATTCCTCGCC GACTACTCTA TCAACCCCTC TCTCGCCTCG TTCCACTTTA GTTCTGACTC TTCAACCGGA AACGACAATG ACCCCGCCAT CATTCTTGGG CTCAAAGACT CTTTCCCCGT TGACGAATAT GATCATTATG ATATCCCAAT GGCGACAGCG GATGACTACA ACCCGATGGA CCCGGCATCC AACCGAAGGA GTGGGGAGGG GTATGATTTC TTTGGAAGTG AGGATTATGA TGCTGTACCA GCCTATGGGG ATGGCGGTTT CGATGAAGAT GGTGCGAGTA TGATGGGTGA TCCTGAGGAC GGCCTCTCCG CTCCTTTTCA CAACCCTGCG AACAGTAACG GAGGCTCCCT TGCGCTCCTT GGTCCAGGGT CTTCTCATTT GGGCCCCTTT GATCCCCACC GCCAAGGTCA AGGCCACGAA ATTGTGCTCA CTTTGGGAGA AGGGGGTGAT ATCGGGTCAG GAGGGATGTT TGAATACTTT GATAAAGGAT TCGGGAAGAG TTGGGCTGGC GCAGAACATT GGAGATTAAG GAAGGTCTCT AGAAAGGGTG AGTATTGTAC TTCATTCTAA TCTTCTTCAC TTTTCCATTA TCTTCACCCA CCACTTCCCG TCGAGTTTCG ACTTTCGACT TTAAGCGTTG AGGGTTGAGC TAATATCCAC GACAGATATG GCTACTGCCG GGACAATTAC CACTACAAAC TCAAAAACCA AGGTTGACAA GACCCCCTTC GCAATCGATT TCCACACTCC TATGGTTACT TCCCTTACCT CCTCTACTCA AGCGCTCTTC ACCCCCGCGT CTAATAAATC GTCTATCACC CTCCCGTCGA CTTTTGCCCC CATTAGAACA AAGAACGGCA AGGCAGTGTC GGGCCAGCGT CAGCTTAGGG AAGAGCGCCT TTTACCGGAC GACATGCATT TTAGCAGTCA CCAGCTTTTG AGGCTGTTTT TGAAGCCCCA ATTCTCCTTG AAGATGCGGC CAGGTGGTAG AAACATGGGA GGAATGGGGG GGATGATAGG TGCAGATGGG GAGATTGATG AGAATTTCTG GGCGGCCGCT GCAAAAGAGA GAGAGGGAGG TGAATGTGCT GGGGATGGTA CGTATATTTT GTCTGCCCAT GGAAGGTATA ATTGTCGCTA ACGCTAGCAT CTATCGTCGA CTTCCATTCG ACAGAATTTG GTTCTGCTCC TGCACCATTT GAATCCCAGT TCTTCCAAGA CGACGATGAT TACGGTGACA TGGATAATGA CGTCGACTTT GGGCCTATCC AACCTAATGT TCCTGTCCTC TGCGGCCCCG GTGAAGAGGA AGACGATCTC TGGGCAGGCA CGCAAATGGA ATTGAAAAAG GCTCGTCCGG AGAACGTCAA TTTTACGAAG AAGGCGAAAA GAGTGGATGT GAAGAGGTTG AAGGATGACA TCTGGACGGG TTTGAAAGAT CTTGTACCTT ATTCCGATAA AGCTGGTGAT ACAGATACCG ACGATGAGGA TTCCACCCCT TCCACACCTC CTGAACCTTC CGATTCCGAA CCGGTCAAGA CATTCTCCTC CATTATCCAA TCTCTTCGCT CAACTTACCC ACCTCAGAAA ATGTCTGAAA TCTCGACATC ATTTTGTTTC ATTTGTCTGT TACATCTGGC GAATGAGGAA GGGTTGCGAA TCGAGAGTGC GAGAGGGGAC GGAAAGGAAG GGGAAGATGT GGGCTGCGTG GGAATAGCGC CAGTGGGAGA AGACGGGGAG GTTGTTTTGG GCGAGGGATT AAATGCTTTG CTGGGGATGT TGGGCGCTGG TAGAGGTGGG TCGGAAGGAA TGGAAAGCAC AAGTGAGGGA GTAAAGAAGG ATAGGGTGAT TGGCGAGTTG GAGGCATTGA AGGTGTACAA GGTGCGCCTT TTCTTCTTTT GA
|
Protein sequence | MAVLHSKRPR MPANSQGIHQ QTCINDDAAE KAKRRKSAHF HTVPDHTSIS NENENPKNQA GKRVISGLAI QQQGLIQKRG KRLSAVEPNM PEVRIEVKEN KYEEWMKLAT DNKITANNTW SFALIDYFAD LTLLRNGPDD QSINFQKASC TLDGCVKIWT SRVDSVATET GKLLSGLAGG SAETGEDDGS EGEEDEAGEP KTTRKTVRSE ATLAKSFAQL QIKKFDLEFT VDPLFKKTSA DFDEGGAMGL LMNHLSVDNK LREVFDAGDA VADEQDLDEE KEEGGGGMID EVVQLEKLRT SIKRELTRVT EDYIPITKFL ADYSINPSLA SFHFSSDSST GNDNDPAIIL GLKDSFPVDE YDHYDIPMAT ADDYNPMDPA SNRRSGEGYD FFGSEDYDAV PAYGDGGFDE DGASMMGDPE DGLSAPFHNP ANSNGGSLAL LGPGSSHLGP FDPHRQGQGH EIVLTLGEGG DIGSGGMFEY FDKGFGKSWA GAEHWRLRKV SRKDMATAGT ITTTNSKTKV DKTPFAIDFH TPMVTSLTSS TQALFTPASN KSSITLPSTF APIRTKNGKA VSGQRQLREE RLLPDDMHFS SHQLLRLFLK PQFSLKMRPG GRNMGGMGGM IGADGEIDEN FWAAAAKERE GGECAGDEFG SAPAPFESQF FQDDDDYGDM DNDVDFGPIQ PNVPVLCGPG EEEDDLWAGT QMELKKARPE NVNFTKKAKR VDVKRLKDDI WTGLKDLVPY SDKAGDTDTD DEDSTPSTPP EPSDSEPVKT FSSIIQSLRS TYPPQKMSEI STSFCFICLL HLANEEGLRI ESARGDGKEG EDVGCVGIAP VGEDGEVVLG EGLNALLGML GAGRGGSEGM ESTSEGVKKD RVIGELEALK VYKVRLFFF
|
| |