Gene CNL06530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNL06530 
Symbol 
ID3255001 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006681 
Strand
Start bp818172 
End bp821902 
Gene Length3731 bp 
Protein Length1053 aa 
Translation table 
GC content53% 
IMG OID638254128 
Productconserved hypothetical protein 
Protein accessionXP_568174 
Protein GI58261528 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG0419] ATPase involved in DNA repair
[COG3889] Predicted solute binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGACG GATTAACCAG AGAGGATATT ATCCTTCAAA ACCTTGGGGA CGACAGGTCT 
GAAAGTGGTA ATGTCGAGGA GGATGAGAGG GACCGAGCGC TGGGAGAGGA GGATGACGGG
CAAAGGGGTC ATGAGGGCTC TAGCGAGCCA GGAGAAAATG ACAATCAAGG TGTCGGAGAG
GAGGTGGAGA AAGAAGAGGT CAAAGATGCT CAGCAGGAAC ATGGGGCCGA TGGAGAGGCT
GCCGAGAAAT CAGCGGAAAC CTCAGTGGAG GAAGTTACGC CGGAGGACAA TGGAGACGCT
GCCGCCGATG CTGTGCCCCA AGTCAAAGGC GGTGACGATG AAGAGCCTGT AGAGATGGCA
AAGGAGGTTG ACCTTGAGGA CAAGAAGGAA ACTACCACGG GAGTCAGAAA GGTGCTCAAA
AGCGGCGTTT TCGGTGGTAA GTTACCTGGA GAATCAGCAA TACTTTATCC GTCGCTCGTA
CTTATGGCCA TTGTATAACA GATGCTCCCA AGCCTACACC GCTTCCCAAG GCAGCTGCAG
GTGTCGCTTC CTCTGCCCGA CTCTCCCGTC CTTCTCTTGC TCCCGTTAGG CCTGGCGCTG
CCGCAACCAA GACTACTGCG CCCTCAACTT CAAAGCCTGC TTCCGGCTCT GCTGCCACTA
CTTCAGCTGC TGCCAGGAAG ACTGGTGCTT CAAGAGCGTC TGCACCTGCT ATATCCGGCG
CTAATGGAAC TATAGCCAGA CCCACAACCA CAACGGCGAC GTCCAGCACT CGACCGAGGA
CCACGACCGC TGCTTCTGAC AGGACTACAT CTTCTGGTAC TGCTCGCCCA GCGACTACAT
CTACGACCAG TACAATTGCG GCGCGTGCTA GAGCAGGTAT GACCAAACCT TCAGTCCCTA
CTGCAGCTTC TGCTCGAACA GCTGCTCGTC CCACATCTTC TACTACCGCT CGCCCAACCC
ATCCCACCAC TACAAGCACT CTCGCCAGAA AGCCTGAAAC CAAGCCTGCG AGCTCTACCG
CTACCGCTAC TCGCACTACC AGGCCTTCCG TCACCTCTAC CACTTCTACT GCTACGCGTG
CACCACTGGC TTCTCAAAGG ACAAGTGCCT CTGCTGCTGG AACTACTGCC GCGAGGACAG
GTGTGACTAG ACCTTTGGCT GGAAGGGCTA GTATGGCACC TACCGCTTCT TCGTCACGAG
CAGCAACTGG TGTACCACCC AAAGTCAGAG CAGGTTCTGG TCCTAGTACG CTTGCCTCCG
GTGGGAAGGA GGTGACCGTG CTCAAGGCCA AGGTTGAGGA GCTGGAGAAG AACATTGCGG
ATGAGAAAAC CAAGTATGAA GAGAAGATTG CCGCTTTGGC TCAGGAGAAG GTTGATCTGG
AAGAATGGTA GGCTTTTCTT TTTTGGCTGA TTTTGGGTGT CGGCAGTCTC TGATAAGTCT
GGATCGTAGC CATGGGAAGG CTTTGGAAGA ACTTAGAGCA GAGCTTGCAA ACGCCACCGA
TAAGGCTGGC TCTGATGCCG AGGGCAAGGT AGGTCCCCGT GATTCACATA AACCTCAACA
GCTGACACGC AGCAGATTGC CGAGCTTACC GCCTTGCACG AGACTCAACT CAAGGAGGCC
GAGGAAGAAC GCAATCGGCT CATGATGGAA ATGGTCTCCA AGCTTCAAAA GTGAGTTTGG
TATTGAATAA AATCTACAGG ACTAACTCGC ATTGTCTCAG GATGGGCGCT GAGTACTCGT
CCATTCAAAC CCAGCTTCAA TCCGCTCGAT CTGAACTCAC CTCGTCCGAA AACGAACTTT
GCTCGCTCAA GTCATCCCTC CAAACTGCTC AAGACGAACT CTCCCGACTC CGCACTACCG
CCTCTGACAG AGACACTGCT TTTGCCGAGC TCGAATCGTC CAAAGCTTCT CTTCAAACTC
GACTCGATGA GCTCGAAACC ATCAGAAATT CTTTGGAAAC GAAGCTCGCT GAGGGAGAGG
GGGAGGCGGA TAAGTCTTTG GCAGATGTTG CTGGGCTTGG AGATAAGGTG AAGGAGCTCG
AGGACCAGAT CGTGGAGCTT GAAAATAAGC TGGGGAGTGA AAAGGGTGTG TGGAAGCAGG
AAGAGGTCAA GTGGCAGGAG ATAAAAGCGG TAAGTAAAGA TGTTGAGTCT GTTTTAGATA
CAATGGATGC TGAAGAGCTG CATCAGGCGC TGGAAAAGGA GATTGAGGAT CTCAAGAATG
CCGCGGAAGG CCATGCCGAA GGACTTTCGA GGGCGTCTAG CAGTGCTGAA GCGAGCAAAG
AGGAACTTGG CGTGAGTCTC CTTTTTCCCT TTCCAGGTAA CTGTTTGCAA TGTCATCTGA
CGCTGTCGAC AGGCTCTTCG TATCGCCCAC GAACAACTTA CAACCACCTA TGCCGGCCTT
GTTGAAGCTT CGTCCCGTCA TCCCGAGGAC GTTGAAAACC TCCAGCGACA ACTGAAAGAA
GCGACTGACA AGCATGGAGC TCTTCTTCTC GAAGCGTCGT CCTCAACAAA CGACCAAAGT
GCCGAGTTGA AGGCCCAAAT TGAAGAGTTG AAGAAAGAGA AGGAAGAGAA AGAGAAGGAG
GTTGAGGAAT TGAAGGGCAC TTTGGAAGAG GTTGAGCAGG AAGTGGAGTT GCTGAAAAAT
GCGAGAAGAG AGGGTGAGGA GAGAGAGAGG CAATTGAACA AGGTATGCTT TATCGTGATT
TTGTCTCTGC AATGGGTGCG CTAAATGTTA ACCTGTAGAT TATCGCTGGT CTTGAGGCCG
AAATTGTAGA GTTGAAGGCC GAGTTTGAGG ATCGATATAC CGCTGGGTAT GAAGATGCCA
AGGTCAGTGT CTATTTAGCA CATTTTCGTG GAACCATGAC GACTAAATTG TCCTTTTAGC
GAGCCGCTGG CGAAGAACAC CACAAGGAAC TTGCTTCCAT CCGCTCAGAG ATTTCCGTTA
CCCACTCGCG ACTCCAGGAC GCCCATACCG CCGAACTCGA ATCTCTCAAA GCTTCCCAAT
CTACGACGCT TGCCACTCTC AACGCGGACC ACAGCAGCCA AACGTCTGCG CTTGGATTGT
CTCTCCAAGC CGCCAATGCC CAAGTGGAGC AGGATCAAGC CAAGTTGGAG TCCGTTTCTG
AGGAGAGGGA TGCGCTTGCC GAACAAGTAG AGAGGTTGAA GGCCGAGTTG GAGGGCGCTA
GTGCCAGGGG CGATGAGGTT GATCCCGAGG TTGAGGCCGA GTTGAAAAAG GTCAAGGCGG
AGCTGCAGCA TGTCTCTGAT GAACTTGCTG GTGCCCTCGA GGTGAGTTGT CCATGTCAAA
AAATGTGACA TGTATCACTA AGACAGTTTT GACGATAAAA CAGATGTCTG AGATGAACAA
GGCCCACTTT GAGCAGACGC TCTCGACTAT GCAAGAACAA CAGGCCGATG AGGTTCGAGC
GGCGGTAGAG GGCCGAGAAA AGCAGTACGC ACAGGAGAAG GCGCAGTACA CCAGCGAGGC
GGGAGAATTG AGGGCGGAGA TGGAGAAATT GAAGATTGAG CTGAATGATG AAAAGGCGGA
GAAGGAAAGT GTGTTGGCCA GACTTGCTGT AAGTTGTTTA ATATACGCAA GACGGGCGGG
TGTAGCTGAG CACTCCACAG GAGAAATTGG GCGCTCCTTC TACACCCCCT CGAGCCGAGA
TTGTCAGCTC TCCTTCATTC GCCAGACTGC ACGAAGCACA CAACGCCAAG GTAACTGAAC
TGGAGAGGTA A
 
Protein sequence
MADGLTREDI ILQNLGDDRS ESGNVEEDER DRALGEEDDG QRGHEGSSEP GENDNQGVGE 
EVEKEEVKDA QQEHGADGEA AEKSAETSVE EVTPEDNGDA AADAVPQVKG GDDEEPVEMA
KEVDLEDKKE TTTGVRKVLK SGVFGDAPKP TPLPKAAAGV ASSARLSRPS LAPVRPGAAA
TKTTAPSTSK PASGSAATTS AAARKTGASR ASAPAISGAN GTIARPTTTT ATSSTRPRTT
TAASDRTTSS GTARPATTST TSTIAARARA GMTKPSVPTA ASARTAARPT SSTTARPTHP
TTTSTLARKP ETKPASSTAT ATRTTRPSVT STTSTATRAP LASQRTSASA AGTTAARTGV
TRPLAGRASM APTASSSRAA TGVPPKVRAG SGPSTLASGG KEVTVLKAKV EELEKNIADE
KTKYEEKIAA LAQEKVDLEE CHGKALEELR AELANATDKA GSDAEGKIAE LTALHETQLK
EAEEERNRLM MEMVSKLQKM GAEYSSIQTQ LQSARSELTS SENELCSLKS SLQTAQDELS
RLRTTASDRD TAFAELESSK ASLQTRLDEL ETIRNSLETK LAEGEGEADK SLADVAGLGD
KVKELEDQIV ELENKLGSEK GVWKQEEVKW QEIKAALEKE IEDLKNAAEG HAEGLSRASS
SAEASKEELG ALRIAHEQLT TTYAGLVEAS SRHPEDVENL QRQLKEATDK HGALLLEASS
STNDQSAELK AQIEELKKEK EEKEKEVEEL KGTLEEVEQE VELLKNARRE GEERERQLNK
IIAGLEAEIV ELKAEFEDRY TAGYEDAKRA AGEEHHKELA SIRSEISVTH SRLQDAHTAE
LESLKASQST TLATLNADHS SQTSALGLSL QAANAQVEQD QAKLESVSEE RDALAEQVER
LKAELEGASA RGDEVDPEVE AELKKVKAEL QHVSDELAGA LEMSEMNKAH FEQTLSTMQE
QQADEVRAAV EGREKQYAQE KAQYTSEAGE LRAEMEKLKI ELNDEKAEKE SVLARLAEKL
GAPSTPPRAE IVSSPSFARL HEAHNAKVTE LER