Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNL06310 |
Symbol | |
ID | 3254808 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006681 |
Strand | + |
Start bp | 745159 |
End bp | 747113 |
Gene Length | 1955 bp |
Protein Length | 443 aa |
Translation table | |
GC content | 51% |
IMG OID | 638254106 |
Product | conserved hypothetical protein |
Protein accession | XP_568155 |
Protein GI | 58261490 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.210237 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCAGCG ATAAATTCAT CAGCAATCTT TTCTCTCTGT CTCTCTTTGA CACCCCGCCC ACCGCCATGT CCTTCTTCAA GTCAAGATCT GCCTCGGCGT CCACCGCCTC CCTCAAGCCA GAGTCCTTGG GCCCAAAGAC CAGTGAGGTC TTCACCGTGC CCCCGCAAGA ATCGAGCGTG AAGAAAAGGT GGGAGTATGA TGATCATCAA CTCGGCCTCG TACGTTCGTT TCTTTTGTCT CCGCCGGCAG CCGGTGTCAA TCGCTGACTT GTCACCACAG ATCGCGCAAC TCAAAGAGGT CGGTCTGCCA TACACAGATG AATCAATGAA GGCACTAATG CACTTTTTGG CAGTACACCA AAACTATCGC CCTCCCAGAG TCTGACGAGT ACTACCCTTG GGAGCAGCGT TTCCTTTCTG ATCCTGCTAC CCATGCCCGA TACATGCGCG CCGCTAAATG GAAGCTCCAT GACGGCAAGC ACAGGATCAG GGGAACGATG GAATGGAGGA GGGAGTATAA GCCAGAACTG ATACAGCCCG ATGATGTTGG TGTTGAGGCC GAGACTGGTA AGATGTAAGA TTTGCTTCTC CTCTTTTTTG GGGCCCAATG AGGGGTGGAC GGGGTTGGGT GCGAATTTTG GCTGACGCGA CGTCTACGCG TAGTATCCTT ACAGGCTTCG ATATGGATGC CCGACCAATC CTCTACATGC GACCCGGTAG GGAAAACACC GAGACGAGCC CGAGGCAAAT TAGGCATCTT ATCTATCATC TGTACGTTTT TTTTATTCCC CTTCCACTCT TGGGGTTAGA CAAACGTGTT TACTGACCGA TATCGTAGTG AACGAGCAAT CGACTTGATG CCTCCTGGTC AAGAACAAGT CGCCATCATC GTCGACGTAA GTCCAATCTC CTCTTCCTCC TCACTTCTCA CCTTCTCTTT CTTTCCCCTG CTCCTTTCTC CTCCTTAGGG TCCCGCTGAC ACCTACACCA TCACACGAAC AGTACAAATC TGCTACATCC CAATCCAATC CTTCCATTGG TACAGCCCGC AAGGTGCTCC ACATTCTCCA GAATCATTAT GTTGAACGAC TTGGGAGGGG TTTGGTCGTC AACATGCCGT ATGTCGTTTT TCTTTGGTTA CGCCTTGCAA TCAAACGAAA CAATGGCTGA CTCTATATGA TTCCTGAATA AAAACAGATG GTGGATCAAC GCCTTTTTCT CCGGTATCTC CCCCTTCATG GACCCCATCA CCCGCGACAA GATCCGATTC AACCCCCGTC TACTCGACCT CGTCCCCGCC GCCCACCTCG ACTCAGAGTT CGGTGGGGAC TATAATTTCA CATATGATTA TTCCGTTTAC TGGAAGACGA TTACCGAGTT TTGTCATATT GCTCCGAACG GGAGGCGGGT GCCTCCTCCG GGCAAGGAGG AGGAGGGGAA GGGGAGGGAA GGGTGGATCC CGCCTGCGGG GAATGGGATA AAAGCTGCGG TGGAGGGGTA CGTGCCGAAA GAGGGGACCG TGAAGAGCGG AGAAATCGTC AAGGCTGGCG AAAAGAATGA AAAGTCAGAG AAGACGGGGA AGGGTGCTGC CGCTACAAGT GCAAATGGCG TCGCCGGTGC CGCTCCTACC GCTTCCTCCA CCACCGCCCC CGCCCCACCA GAAAAAGAAA TGGAATCCCT AGCCATCCAA ACAGCCCCTG GCGAACCAAT CGGCGGGTCC GTGTTTGATC ATCCGCCTAG TGAGGGTGAA GTGCATGAGG CGAAGAAGAG TTTGAATGTT TCTGCGTAAG CCGGGAACTC GTTTTACACG AAAACATTAT TGAAAACCAT CCCGCTCTAT AAATTATGGA TTGTTTTATT ACTTTAGATT TTTCTGAATT TGGTACAATA CGGAAGAGTA ACTAGCCGCT TTGTTTAGTA TACAATAGTA CTTCGCTCTG CATTGCTTTG CATTT
|
Protein sequence | MSSDKFISNL FSLSLFDTPP TAMSFFKSRS ASASTASLKP ESLGPKTSEV FTVPPQESSV KKRWEYDDHQ LGLIAQLKEY TKTIALPESD EYYPWEQRFL SDPATHARYM RAAKWKLHDG KHRIRGTMEW RREYKPELIQ PDDVGVEAET GKIILTGFDM DARPILYMRP GRENTETSPR QIRHLIYHLE RAIDLMPPGQ EQVAIIVDYK SATSQSNPSI GTARKVLHIL QNHYVERLGR GLVVNMPWWI NAFFSGISPF MDPITRDKIR FNPRLLDLVP AAHLDSEFGG DYNFTYDYSV YWKTITEFCH IAPNGRRVPP PGKEEEGKGR EGWIPPAGNG IKAAVEGYVP KEGTVKSGEI VKAGEKNEKS EKTGKGAAAT SANGVAGAAP TASSTTAPAP PEKEMESLAI QTAPGEPIGG SVFDHPPSEG EVHEAKKSLN VSA
|
| |