Gene CNL05390 details

Gene Information

• Locus tag: CNL05390
• ID: 3254855
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006681
• Strand: +
• Start bp: 497996
• End bp: 500102
• Gene Length: 2107 bp
• Protein Length: 464 aa
• GC content: 47%
• IMG OID: 638254013
• Product: cAMP-specific phosphodiesterase, putative
• Protein accession: XP_568076
• Protein GI: 58261332
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG5212] Low-affinity cAMP phosphodiesterase

Plasmid Coverage information

• Num covering plasmid clones: 36
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTCAAATTCT TTAAGCTTCA TAACCTCTTT TCGTCTATCC TATTATCGCA GCATCACGTC 
AGTGTAACCT TGTGTGGGAC ATGTTCCTGA AAAACCAGAT TCGACTTGTC GAGCATCAAA 
CCAGTTGAGC CCTAAATAAA ATAATTAATG AGCCACTAGC CGCAGATCCC ATCTCTTTTA 
TGCTCCCACG TCAACCACAT CAACAAAAAA CAGTACCCCC GCTTGGATGG GAAACGGAAC 
TCAATTTCGA TCCCGGATAG ATATCTCTGC CACAGGGAAG ACAACCGCCG CTCGAGCGAG 
TGAACACAAT TCAATGAAAG GATTTCAAGA CGTCATCGAC CAAACATCAG AGCCGGCCTT 
CGAGATCGTA GTCTTGGGAA GTGGTGGTGG ACCCTTAGAG ACAGATTGCG CCGGGCAAGT 
CTACTCCATC ATAGGGCAAG CAACCGAAGC TCATCCTTAA GCGCCTGTTT TATAGGTACC 
TGGTGAAAGC TATTGACCAA CGCTGGGAGG ATGGTATCCT GGGGCTAGAA GGAGGTCAGT 
GCTGCTGATG CTTTCAGCTG GGGGAAATAA GATACTCAGG GTGTTTCTCA CAGGCTCAGG 
CTTGGGCGCT CTTTCAGCCT TGTTTTCTTC GCAATCCCCA GATACTATGT TCCCTGGTAT 
CACTTTTCCT ACGGACTACA GCACTCCTTT ACTCCAGGCT TCTTATGTCT TTTCCTTCGT 
ATCGTAAGCT CAGCCACTAA TGCTCGAAAG GGATACAGGA TCGACACTGA ATGAATGGCA 
TCAGGGGCTA TCTCATCACG CATGCTCATC TTGACCATGT CCAGTCTTTG ATCATGCTTA 
CGGGTTCAGC ACCTCCCCGG CCCAATCTCG CAGCCTCCAC CTGCGCCTCT GTTTCGCAAC 
CTTTGCCTCC TCTGTGCCCC ATTGTATACG GAACTACAGG AACATTGGAA AAGCTGTCAA 
CAGCATACAC TGGTCAGATA TGGCCTGAGC TGGTAGCTTG GGTTCCAGGA CACAATGAGG 
ATCGCAAAAC AGAAGCGCCA AAGAAGCGAA GAAAAGTGAA TCAAGCAGAC AAGCATACAA 
AATCCAAATC TCCTGAGTCT GATACGCGAC TTCCATGTAA CAAGAATTCA ACTGCTTCAT 
TAGTACTATC ACCGTAAGTC CTTTTCTGGG ACCGGTTGCC GAAACTGCCC TCAACTTTTA 
CGCCATAGCC TACAGACGAA CAGCCCCCCT CAATCACTAA TTGGCGCTCC TTCCTTAGGG 
GTCAGGCTAT ACCCCCTAGT TCATGGAAGT ACATCCAAAG AAACTTACGA GTCTTCTGGT 
GCATTTATCC GACATATGCC ATTACCATAT CTTTCCCCCA AACCAGTGAC CAGCGTTCGC 
TCAAGACGAA AGCCAGTGGA AGGCAAAGAA TTTCTTTTTT TGGGAGATAT GGAATCGGCC 
TATAGGAAAT CAGGAGAAAA TGGCACGCAT CAGGAACTAA GAGCCAAGGC CGGTCGACTA 
AACTCCGTGA TATGGGAAGA AGCGGCAAAG TCATGGATTG AAGGACGGTT ATGTGGTATA 
TTTGTAAGTC TCTTTCGTAC TATCAGACCT GTTGCTGACG TTTCTTGAAG ATTGAATGCT 
CGTATGATTC AAGTCGACTA GGACAGCACA TGTACGGCCA CCTTTCTCCC CCCGCAGTCT 
ATCATGAGTT GAAGGTACTT GCTGGTCATG TTAGCCGAAC AAAAACGTGA GTTGACCCAT 
CTTTCTTATC GCAACTCTTG GCTTATCAAT TCAACCGAGG CAGAAGGCCA CTTGATGGTC 
TGAAAATATT CATAACACAT ATTAAGGAAA GCCTCGTTCC CCATCCTGAA GGTAAAACCC 
AACATGAGAT TATAATGGCC CAACTGCAAG AGTTGGAAAA AGATGGGAAA TTAGGCGTCG 
CATTCATTCG CCCAGTAAAA GGCGATCGCA TAAGTGTGTT CAGTTGACAC CAAGCGGATT 
ACAACCAGAT CAATGCTGAC GCTGGTTAGT CCTTTAGGTT GTATTAGTAT GTTCGAAGTT 
GTAGAATGGG AGATGAGCTG GGGGAGTCTA TAATCCTATT TCCATGGGCT GCTTGCAGTT 
TGCAATC 

 

Protein sequence

MGNGTQFRSR IDISATGKTT AARASEHNSM KGFQDVIDQT SEPAFEIVVL GSGGGPLETD 
CAGYLVKAID QRWEDGILGL EGGSGLGALS ALFSSQSPDT MFPGITFPTD YSTPLLQASY 
VFSFVSGYLI THAHLDHVQS LIMLTGSAPP RPNLAASTCA SVSQPLPPLC PIVYGTTGTL 
EKLSTAYTGQ IWPELVAWVP GHNEDRKTEA PKKRRKVNQA DKHTKSKSPE SDTRLPCNKN 
STASLVLSPL QTNSPPQSLI GAPSLGVRLY PLVHGSTSKE TYESSGAFIR HMPLPYLSPK 
PVTSVRSRRK PVEGKEFLFL GDMESAYRKS GENGTHQELR AKAGRLNSVI WEEAAKSWIE 
GRLCGIFIEC SYDSSRLGQH MYGHLSPPAV YHELKVLAGH VSRTKTRPLD GLKIFITHIK 
ESLVPHPEGK TQHEIIMAQL QELEKDGKLG VAFIRPVKGD RIIL