| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNL05290 |
|---|
| Symbol | |
|---|
| ID | 3254805 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006681 |
|---|
| Strand | - |
|---|
| Start bp | 475563 |
|---|
| End bp | 477233 |
|---|
| Gene Length | 1671 bp |
|---|
| Protein Length | 391 aa |
|---|
| Translation table | |
|---|
| GC content | 46% |
|---|
| IMG OID | 638254003 |
|---|
| Product | conserved hypothetical protein |
|---|
| Protein accession | XP_568068 |
|---|
| Protein GI | 58261316 |
|---|
| COG category | [C] Energy production and conversion
[R] General function prediction only |
|---|
| COG ID | [COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases |
|---|
| TIGRFAM ID | [TIGR02824] putative NAD(P)H quinone oxidoreductase, PIG3 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTCATTCGTC GCATGAGATC TTGAAATAAT CACTGGTAGT AACGAGGAAT CCACAGTAGA
CTATATTTAC CTTCCTATGT CACATTCCCG ACCTCTAATT AGGACACTGC AGACAAGACA
TATTCCTCGT CTTCTCTCTA CTCCAACCCC TCGGGCAACC ACATCAATAA CCTCAAGGTA
CATTCGGCCG TGCTCCATTC GATTATTCGG AACAACAGTC GCCAGACAAG TTCAAATACC
AGAAAACATG AAGGCTGTAT TGATCAAAAA TGGTACTGGC CACGCCGATG ATCTCTATTT
GGGTCATGAA CCCACGCCCG AACCCGGAAA TGGCCAAGTC CAAGTTAAAG TGAGTAAATG
ATAGTGGGGG GTTATCGTAA ATACGCTTTG TTTGCTAGGC TGACCACAGA TTTCGCTGTA
GATTAGGAAC TTTGGTTTGA ACCGCATGGA TATCCTTCAA CGTGAGGGAA AGTATCCCCT
TCCTCCTCAG GCTTCCAAAA CCATCTTGGG GGTTGAGTTC TCAGGCATTG TTACCAAACT
TGGAGAGGGA GTGAATAAAT GGAAAGAGGG GGATGAGGTA TTTGGTTTGT CCTATGGAGT
AGGTGGTTTA TACTTCCCTT TGACCCACCC CTGACGCACC ACCTCCAGGG CGCTTATGCG
GAGTATATCG TGTCTCCTGA GATAATGCTT TTGGCCAAGC CCGAGAAGTT GAGCTGGGTC
CAGGCTGCCT CTATTCCTGA GGTGTGGATG ACCGGTAAGT GATTTGTCCC CGTATAGCCA
TTACTGACTC AAAAGGAATA GCTACTCAAG CTTTGACGCT CGAAGCGCCT CTGAAGGAAG
GCCAGAATGT CCTTATTCAC GCAGGCGCCT CTGGTGTTGG TATCGCTGCG ATCCAGATTG
CTTGTGAGCG TCACCTTCCA ACCATATACG AAATCTATGT CTAACTGCGA TTAGTGCACG
CTCTCGGTGC TGCCAAGGTC TTTACAACTT GCGGAACAGA TGAAAAGGTG GAGTTCTTGA
AGCAGCTCGG TCATTCCGAC AGATTGCATG TGTTTAACTA CAAGACACAA AGTAGGTCAT
TATAGTCTTG TGCGGTTTTT TGTATTAACA CAAAATAGAT TTTGAGGAAG AAATCAAAAA
AATTACGAAT GGTGTTGACC TCGTCATCGA CTTTATTGGG ACCAACTACT TCCTCCAGAA
CGTTAATGTC CTTCGGCTCG ATGGTACACT TTACTCCCTC GCCTTCATGT CTGGCGCCAA
ATTCCCGGCG GGAGCTAGTA TGGCTCCTTT CTTAGGCAAG AGATTGACTT TCAAGGGATC
TACCTTGAGG TCCAGAAGTC CAGAGTACCA GGCCAAATTA TTGAAGACGT TTGAAGAAAA
GATCTTGCCC AAGATCCTCG ATGATACTAT GACAATCAAA GTTCATGAGG TGAGCTCACA
TGCTTTGGTC CACATGGAAA GCACTTATGT AAATATCCGT TCAGATTTAC CCCTGGTCCA
AAGTTACTGA GGCCCACAAG GCTATGGAGG GCAACAAGAA CAGCGGCAAA GTAGGTTAAG
GTTTCCTTTG GGACTGATCA TAGCTGACCC CTACTGGTTA AAGATCGTCC TTGAAGTCAC
CGAATAATGT AATAATGAAA GTGTAGCAAT ACATAATATA GTCTGCCAGT A
|
|---|
| Protein sequence | MSHSRPLIRT LQTRHIPRLL STPTPRATTS ITSRYIRPCS IRLFGTTVAR QVQIPENMKA
VLIKNGTGHA DDLYLGHEPT PEPGNGQVQV KIRNFGLNRM DILQREGKYP LPPQASKTIL
GVEFSGIVTK LGEGVNKWKE GDEVFGLSYG GAYAEYIVSP EIMLLAKPEK LSWVQAASIP
EVWMTATQAL TLEAPLKEGQ NVLIHAGASG VGIAAIQIAL HALGAAKVFT TCGTDEKVEF
LKQLGHSDRL HVFNYKTQNF EEEIKKITNG VDLVIDFIGT NYFLQNVNVL RLDGTLYSLA
FMSGAKFPAG ASMAPFLGKR LTFKGSTLRS RSPEYQAKLL KTFEEKILPK ILDDTMTIKV
HEIYPWSKVT EAHKAMEGNK NSGKIVLEVT E
|
|---|
| |