| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNK02020 |
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| Symbol | |
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| ID | 3254521 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006680 |
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| Strand | - |
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| Start bp | 602518 |
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| End bp | 604451 |
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| Gene Length | 1934 bp |
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| Protein Length | 535 aa |
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| Translation table | |
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| GC content | 47% |
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| IMG OID | 638253695 |
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| Product | hexose transport-related protein, putative |
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| Protein accession | XP_567678 |
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| Protein GI | 58260536 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00879] MFS transporter, sugar porter (SP) family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.50413 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGGAG GAAATTTTGC TTTCAACACT GTACCAAACA ACACAGCGGC TTCATGGTGG
AATGACCCGG GATTGCGGAA ACTTGTCTTC TTCATGGCCA TATGCACTAT CTCTGCCGTG
AGTCCATTCG ATCGGCTCAG GACGTCAACA TTGACATTTT GTCAGGTAGG CAGTGGTGTC
GATGGTTCTT TAATCAATGG CCTTCAAATC ATTGATTCCT GTAGGCTTCA TACCTTTCAT
ATTTATCTTC CATATCTATA CACATGTGCT AACTCCCTAA ACAGTCATGG ACAACCTGGG
AGATATATCT GACAACTACC TCGGCCTTGT TATCGCGTCT TTCTCTCTTG GTGCCCTCCC
AGCCTTACCC ATCTCTGCCT ACTGTATGGA CCGCTTCGGT CGTCGTTCGT CTCTCCTATT
AGGTTGTATC TCTGTCATCG TGGGAGGCAT TGCCCAGTCT TTTACCCATG GTGCCAATGC
GTTCTTGGGC ACAAGATTCG TCATTGGCTT TGGTATTGCC CTTACAGGTA CATCAGCACC
AACACTTTTG ATGGAGCTTG CACACCCTAG GATGAGAGGT CAAGCAAGTC TGTTGTACAA
TTGTAGCTGG TATATCGGTG CTGTCATCAT TGGATGGATC ACGTATGGAA CCTTGGTAGG
GATGACTGGT AACTGGAGCT GGAGGTTGCC GTGTCTCCTT CAGATCACCC CAGAGATCTT
GCTAGCTGTT ATGTGAGGCC ATTCTCGGTT TCAAGTAAAA TGATATATTA ACGTATCCTT
AGCACTGTTA CACTGATGCC CGAATCCCCT CGATGGCTGA TTTCCAAGGG CCGCAACGAG
GAGGCTCTCA ACACTCTTGC CAAGTACCAT GTTAGTGTCT CAAATCCCCT GCAATGTGCC
ACTATTAAGT GAAACACTTT ATAGGCCAAT GGAGATAAGG AAGATGCTTT AGTCAAGCTG
GAGTATGACG AGATCGTAGA GGCCTTGGAG CTCGAGAAGA CAAGTCAACA TGGCACATCC
TACCTGACTC TTCTCAAAAC CCCAGGTAAT CGTCACCGTC TTATCATTTG TATCCTTGTC
GGTTTCATGT GTCAATGGTC TGGAGTGAGT GTTTCCATAA ACTATCATCC CCGCGAGCAT
TTGTTTATGA GTGTATTAGA ACGGTATTGT GACATACTAT CTTTCCCCCA TCCTGACCAC
TGCCGGTGTC ACATCTTCCG CCACTCAAGC GCTCATCAAT GTTTGCATGA ACATTTGGAA
CTATCCGTGG GCCATTGCTG GGGCTCTTTC AGCCAACAAG CTCGGTCGTC GACCACTGTT
CTTCATTTCT ACCGGGGGCA TGTTGATTTG CTACATTATC ATCACCGCTT TGGCCGCCGA
GTTCACCAAG ACCGGTAAAC CAGCGGTTGG GTATGCTCAG GTAGCATTCT TGTTTTTCTT
CTTCGGTGAG TAACCCATGG GATGGAACGG CTCGGTATCT GACACGTGAT AATCAGCATC
ATACGACTTT GGTTTCACAG GTCTTCAGTC GGCTTATCCG ATTGAAGTAC TTCCGTATTC
ACTACGCGCC AAGGGTTACT CTATTACCCA ATTCTGTATC TATCTTGCAA TGTTCTTCAA
CCAGTTCGTC AACCCCATTG GATTATCAAA CATCTCTTGG AAATACTACA TCGTGTATGA
TTGCATTCTG GTGCTTTTCC TGTTTCTTCA ATGGCTGCTC TTGTGAGTCG GACAAGTTTC
TTGACGATCG ACTTTAAACT CATGGTGTCT TTAGCCCAGA GACGAAAGGC CGTACCCTGG
AAGAGATTCG AGAAATCTTT GACAAAGAAC CACTAAGCTC CACGGAAGGT ATGGGCGCCA
ATGGGTCAGA AGCTTTGGAT GATGGTGGGA AGGCAGAAGA AGCATATGTC GAGAACGTCG
GCTCGCGCGT GTAA
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| Protein sequence | MAGGNFAFNT VPNNTAASWW NDPGLRKLVF FMAICTISAV SPFDRLRTST LTFCQVGSGV
DGSLINGLQI IDSFMDNLGD ISDNYLGLVI ASFSLGALPA LPISAYCMDR FGRRSSLLLG
CISVIVGGIA QSFTHGANAF LGTRFVIGFG IALTGTSAPT LLMELAHPRM RGQASLLYNC
SWYIGAVIIG WITYGTLVGM TGNWSWRLPC LLQITPEILL AVITVTLMPE SPRWLISKGR
NEEALNTLAK YHANGDKEDA LVKLEYDEIV EALELEKTSQ HGTSYLTLLK TPGNRHRLII
CILVGFMCQW SGNGIVTYYL SPILTTAGVT SSATQALINV CMNIWNYPWA IAGALSANKL
GRRPLFFIST GGMLICYIII TALAAEFTKT GKPAVGYAQV AFLFFFFASY DFGFTGLQSA
YPIEVLPYSL RAKGYSITQF CIYLAMFFNQ FVNPIGLSNI SWKYYIVYDC ILVLFLFLQW
LLFPETKGRT LEEIREIFDK EPLSSTEGMG ANGSEALDDG GKAEEAYVEN VGSRV
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