Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNK01530 |
Symbol | |
ID | 3254624 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006680 |
Strand | - |
Start bp | 451242 |
End bp | 453167 |
Gene Length | 1926 bp |
Protein Length | 430 aa |
Translation table | |
GC content | 44% |
IMG OID | 638253641 |
Product | ribonucleotide reductase small subunit, putative |
Protein accession | XP_567827 |
Protein GI | 58260834 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0208] Ribonucleotide reductase, beta subunit |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.560854 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CTTCAACTCT TCTACGCCAG ACATGGCAAC TATACGCCAA GCTCCTCCAT CACACCGAAA GCTTCGCACA GCATCTCATT CTTCCTCGGT CTGCTCCTCA GCAAGTACTG AAGGCAGCTT TGGCGACATG CCTCGGATCA ATGACGTTCG GCCGATCTAC GACTCTTCAA ATGCGTCGAT GGAAGATAAA AGGGATGCTA CAAGAATTAC ACTTCCAAAC TCCATAAAAT CGCTGAGCAA TGAGAGAAGC GACAGCAATA AAGGTGGCAA TCCCGCCAAA GAGGGCAAGG TGACAAGGAA ATTCCCCGAA GAGGAAGAGG AAGATATCCT GCGAGAGTCT GAGTCTCGTT TCGTGCTGTT TCCCATCAAG TATAATGAGG TATATATGTT TAGATTTTAT ATGCGGTAGT AGCCTCTAAT TTGTTGTAGA TATGGCAAGC TTATAAACAT GCCCAAGCCA GTTTTTGGAC CGCCGAAGAA CTCGATTTCG GACATGACCT CATTGATTGG CATGACCGGA TGACAGAACA GGAAAGATTT TTCATCCTAA GAATATTAGC ATTCTTCGCA GCCTCAGATG GAATTGTTGG TGGTGAGTGT CTCTATTTCA CGGCTACGCA CCGCGTTACA ACTATATTCT TTGGCCCTTC ATGAGTTACT CCACTTCCGA CATGAATCGC TAACGTTCAT CCACGTCAGA AAATATCGTG TCACAATTCG CTCTCGAAGT CCAAATAGCA GAGGCGCGCG CATTTTATTC CTTCCAATCA ATGATCGAAC AAGTGCATTC TGAGACGTAC AGTCTCTTGA TCGAGACATA TGTTAGGGAT GCGCAAGAGA AGGATTTTTT GTTTAGAGGG ATGACAAACA GTAAGTCCAG CACCTTTATC TTACCATAGT ACGCGATGTT AACAGTACGC GATAGTCCCT TGTATAAAGC AAAAAGCTGA CTGGGCATTG AAATATATCA CAGATGAGCT GGTGCGTATC CACGTAAGAC GATCTCGTCT CATGCTGACC ATCTCACAGC CCTTCCGAAC TAGACTGGTG GCTTTTGCAT GCGTAGAAGG CATTTTCTTT TCTGGGTCCT TTGCTGCTAT CTTCTGGTTG AAGAAGAGGG GATTGATGCC TGGACTGACA TTCTCAAACG AGTTGATCAG TAGGGATGAG GGTATGCACA CAGTGAGTTA TTTCTTCCCT CAATCTCAAT CGTCTTGCTT ATCAGTAAAA GGACTTTGCA TGTCTTTTAT ATAATCACCT CAAGCACCGA TGTTCGACAG ATGAAGTTCA CCATATTGTC TCGGAAGCGT TGGTTATTGA GAAGCAGTTC CTTACCGATG CCCTTCCTTG TGCTTTAATA GGTATTAACG CCCATGTAAG TACTTGTCTC CTTCCCCTTG ACATCTTCAA TTGCTCACAA CTCAATTAGT TGATGTGTCA ATATATGGAA TTCGTGGCAG ACAGACTCGT CGTTGACTTG GGCTATCCCA AGATATACAA TGCCACTAAC CCTTTTGACT GGATGGAATT GATATCATTA CAAGGCAAAG CTAGTTAGTC TGATTTCGTT CAAATCACTT CGGGGGACTG TCTCGGCTGA CACAAGCTCT GTAGACTTCT TTGAATCCCG CGTCTCTGCT TATCAGAAAG CAAACGTGTC CCGTACAGGG ACTCCATCTG GCCAAAAAGA GGATGAGAGA TTAACAAGGC GGGTGTTCAG GACGGATGCG GACTTCTGAG AATGGTCTCA ATGAAGCCTG TCCAACCAGT CACAGGCTTG AAACCGTGTA TTTGTATCAA TTTGAAGCAG TAATGTCTAT CATCCCCGCT CAGGAGCTTT TTGTATCATC ACAAAAAAGA TACATGTAGA GTTAGCTCTA GACCTTGTAT ATAAGCGGAC ATCATTATAG TATTTGCATC TCAACT
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Protein sequence | MATIRQAPPS HRKLRTASHS SSVCSSASTE GSFGDMPRIN DVRPIYDSSN ASMEDKRDAT RITLPNSIKS LSNERSDSNK GGNPAKEGKV TRKFPEEEEE DILRESESRF VLFPIKYNEI WQAYKHAQAS FWTAEELDFG HDLIDWHDRM TEQERFFILR ILAFFAASDG IVGENIVSQF ALEVQIAEAR AFYSFQSMIE QVHSETYSLL IETYVRDAQE KDFLFRGMTN IPCIKQKADW ALKYITDELP FRTRLVAFAC VEGIFFSGSF AAIFWLKKRG LMPGLTFSNE LISRDEGMHT DFACLLYNHL KHRCSTDEVH HIVSEALVIE KQFLTDALPC ALIGINAHLM CQYMEFVADR LVVDLGYPKI YNATNPFDWM ELISLQGKAN FFESRVSAYQ KANVSRTGTP SGQKEDERLT RRVFRTDADF
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