Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNK01390 |
Symbol | |
ID | 3254640 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006680 |
Strand | + |
Start bp | 407784 |
End bp | 409494 |
Gene Length | 1711 bp |
Protein Length | 457 aa |
Translation table | |
GC content | 53% |
IMG OID | 638253628 |
Product | histone acetylation-related protein, putative |
Protein accession | XP_567818 |
Protein GI | 58260816 |
COG category | [B] Chromatin structure and dynamics |
COG ID | [COG5034] Chromatin remodeling protein, contains PhD zinc finger |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.410495 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TCCATATAAT TCGCCCTACA CGCACCCGTA CCCGTATAGA ACCACACTAC AATGCCACCC AAGCTCACAG CTCTGCAACC TCCATCCCCC TCACCTCCAC CCCCCACAAA CGACGCTCAG GACCTCCTCG TCATACAGGA TATCATGGAT ACTCTCGACC AGATCCCACC AGAGCTCACA AGAGTTCACA GCGACCTAAA TGAGCTTGGT GCTGTACTAT ACTGTAAGCG GATATCCTTT ACGACCTTTT CGCTGGGCGC AAAAGCTGAT TTAGCCGGAT GTAGCTACTC TTGTCAGCCT AGAGAAGAAG CTCTACACGC TAATTGACTG GATCCAAGAT CCCAATGTCA CACCAGAAAA ACGGTTTGAG CTCCTGCAGG AGATTGCAGA GGAGGCCGCA AGGTACAAGC TCGGCGGTGA TGATAAGATT CGAGTAGCTG CCGGTGCTTG TGATGGCGTA AGTGTTTGTT CTCCCTTGGG TCGCGCAACA TTTTTGCTCA TCCCCCGGAT CCAGATTTTG AACCACCAGA AACATATCTC CAATCTCCTT GCATCTTCCA CCTTGCTCGT TCCATCCCCA CCTTCTCCCT ACTCTCAATC CCTCACTCTT CCCTTCCCTC AACCGGTTAC TAATTCTCGC CGCGTTGCCC GGGCTGCCAA TTCGCCGTTC GGCAGTCGGG GCTATACCGC AAACGGGGGA CCGTCCGAGA CCAAGGTGGG TGATACGCCT AGCAAAAAGA AGAGGAGTCG AGTGCAACAG TTGGGGGCAA GGGATGATGA TGAGTCGTCG AGTGCGGGCG GGGAGAAGAA GAAGCCTGTT AAGCGAAGAA AGCAGTACGT CTATCTTGTA TGGTCCCCAC ACGCCAACTG GTCTGATGGG CAAGCAGAAA CAGAGCGACT TCACCTACCG ACTCTGTCGT CTCTAACTCT GGTTTTGGCG GGAAACCCAT CGAACCCCGT ACTGCGCGTC AACTCGCCGC TGCTGCCAAC AGGGCCCGCC GTGAAGCCGA TGACGGAGGC TCCGACACTG AATCACGAAC AGGCAACGAC GAAAAGCGCA GCAACGTACC CATGCAACCC TCTTTTTCAA TCGACTCAAA GCGCACCGAT GGTTTGGGCT TGGATACAGG CAGCAGAGAA GGCAGCGGTG TGAGAAGTGC AAACGTAACG CCTACTCTTG GCTACGCCGC GGTCATGCCC CCTACGGCTG AACTCAAGCG TCCATCAAGG CGAGGCGGTA AGCGTTCAAG CACAAATATT CCTGCTGCCG AAGAATTCGA GGAGGAAGAG TCCGAGGGAT ACGGTGACGA CGATAGGTCG AAGAGAGGAG AGAGGTATGC CGAGATGGAG ATGGGTGAGG AGACTGGAGG TGCTGGGGAT GATCTAGATT CAAAGGTGTA CTGCACTTGT AGGCAGGTCA GTTATGGCGA GATGATTGGA TGTGACGATG ACGATTGTGA GATTGAATGG GTGAGTCCAT GTCTTTTATA GTTGGCTGTG GCGTTGCTGA CAGCTCTGGG CGATTTAGTA TCACATTGGG TGTCTCGGTC TGGATAAAAC TCCTGCAGGG AACTGGATCT GTCCCAGGTG TATTGAGAGG CGAAAGAAAC AGCCACGGGG CAAGAAGGGG ACTCGAGGCA AGGCCCGAAA GTAAAAGCTA CTATCGTTAC TGGCACATAC ACTCTTATTC CTTAAAGCAG GTTGTGATAT T
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Protein sequence | MPPKLTALQP PSPSPPPPTN DAQDLLVIQD IMDTLDQIPP ELTRVHSDLN ELGAVLYSTL VSLEKKLYTL IDWIQDPNVT PEKRFELLQE IAEEAARYKL GGDDKIRVAA GACDGILNHQ KHISNLLASS TLLVPSPPSP YSQSLTLPFP QPVTNSRRVA RAANSPFGSR GYTANGGPSE TKVGDTPSKK KRSRVQQLGA RDDDESSSAG GEKKKPVKRR KQNRATSPTD SVVSNSGFGG KPIEPRTARQ LAAAANRARR EADDGGSDTE SRTGNDEKRS NVPMQPSFSI DSKRTDGLGL DTGSREGSGV RSANVTPTLG YAAVMPPTAE LKRPSRRGGK RSSTNIPAAE EFEEEESEGY GDDDRSKRGE RYAEMEMGEE TGGAGDDLDS KVYCTCRQVS YGEMIGCDDD DCEIEWYHIG CLGLDKTPAG NWICPRCIER RKKQPRGKKG TRGKARK
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