Gene CNK00910 details

Gene Information

• Locus tag: CNK00910
• ID: 3254667
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006680
• Strand: -
• Start bp: 286039
• End bp: 288234
• Gene Length: 2196 bp
• Protein Length: 598 aa
• GC content: 50%
• IMG OID: 638253581
• Product: tbc1 domain family protein, putative
• Protein accession: XP_567654
• Protein GI: 58260488
• COG category: [R] General function prediction only
• COG ID: [COG5210] GTPase-activating protein

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TCCGCACTAT GACCCATCCC ATCCAGCCGC CCACACGCCC ACATTCCGCC AATCCGCTTA 
CCCTCAATCC CTCCCTGTCG ATATTCCCCC GCCCATCCTC GCGTCCAACC ATTCCTAGAG 
GCGCCCCCAT GTCTTCATTC GGCCTCGTCA CGAAGGACGC AGAGGATTGG GAGGATGCAT 
GGGACAGCAG TTCAGACAAG GAGGATGGCG GAGAGCCAAG TGGTATGCCG ATGTCCATGC 
CCGGGGGCGG CAGGAAGAGT AGAGACGATG GAGAGGGGAT AGCAGCCAGC TGGGCATCCA 
CTTCGTACAC CCATGTCACA TATCCGAATT CATCGCCTAC AAGGCCAGCT TTACCACAGT 
CGAAAACATT TACAGAAGGT GTCGCACCTC CTGCTCCGGG GACGTCAGCC ATCAACGGTG 
CTCTTCGCTC TCATGGTCAT GGTCATGCTG GAGGGTCGAG GCTTCCGCCA GGAGGGGCGT 
GGGAGATTGT CGAGCCGGAG GAAATCATAG AAGAAGAGCA GGAACCGATC AAGACAGGCA 
AAGAAGCGGT CAGAGTCGAT GTGGAAAACA TTCTTCGTGA TCCTCTTGAG TTGTTACATT 
CCTTATCGCT CGACTCACCT GCCATCTCCC GAGCATCAAG CCGCTCATCC TCTTTCCCAT 
TCTTCGCCTC AAACGACCCT TTATCGTCAG CACCAGCTTC CCCATCCTAT ACACCCACCA 
CTCCCACTGC TGCTACCAAT ATGAAAAGCC GAAAAGACGG GATGAACAGA CAGCGTAGTG 
TGCGGTCAGA GAGAAGAAGA GAAAAGTTCG CCAAGGTCTT GAGAGGAGAC GAAGGTGGGG 
TGGATGTGGG TGAATTGAGA AGGTTAGCTT GGAGCGGAGT GCCGATGGAG GTCAGGCCTA 
TTGTTTGGCA ACTGCTCCTA GTAAGATTCT TTTCGCTTCA AGGAGTGACA CGTATTGACT 
TGGAACTAGA ATTACCTACC CTTACCAGTC CAGCCTCGAC TGACAACATT GAATCGCAAG 
AGAAAAGAGT ATACTCAACT GGTGGATCAG TATTTTGGAC GTGGGCTCTC TTCTCTTGAC 
CAACAAGTGT GTCGTGTTTT TCTCCCACTT CTCGACATTT AGCTAACGAA AGTAGATATG 
GCATCAAATT GAAATCGACG TCCCAAGGAC AAGACCCGGT GTACCATTAT GGAGCTGCGA 
AAAGACTCAG CGAAGCCTCG AGAGAATACT CTATGTCTGG GCTATTAGAC ATCCTGCATC 
AGGCTACGTG CAGGGTATAA ATGACCTCGT CACCCCGTTT TTTGAAGTCT TTCTCAGCGC 
ATATATCGGT CAGTTCTTTT TCCTCGAAAG AATAAAACAG CTGACCAGAA AATACACCAC 
AGATACTGAT CCCGAATCAT TCGACATCTC TCACCTGCCT GAATCAATCC TCTCCGCTAT 
TGAATCCGAC TCTTTCTGGT GCCTTACCGC CCTCCTGAAC GGCATCCAGG ACAATTACAT 
CTCCCAACAA CCTGGTATTC AACGTCTTGT CAAGCGGATG TCTGAATTGA TCAAGCGTAT 
TGACACGCCA TTGGCAACAC ATTTCGAGGA ACAAGGCGTC GAGTTTATGC AATTTGCGTT 
CAGATGGATG AATTGCTTGT TGATGAGGGA GATAAGTGTA AAGTGTACGA TAAGGATGTG 
GGATACATAT CTGGTAAGTT CATCCCATCG TCCCTTTTCC TATCGATGGA GTAGAGCCCT 
GCTTATGTAC GTGACCCTTA GGCTGAAGGT ACAGACGCAT TTTCTCAATT CCATCTTTAC 
GTCTGTTCAG CCCTTCTCGT GAAATACTCC GATCGCCTTC GTGAGATGGA TTTCCAGGTG 
CTTTTTTTTG ACCGCCTCAG TACACGGACG TCACTGATGG CCTTGTTTTC TTACAGGAAA 
TAATCATCTT CCTTCAGCGC CTTCCCACTC AAAACTGGGG CGACCACGAT ATCGAGTTGT 
TACTCTCAGA GGCATACGTA TTGAAGACGG TATGGCAAGG AGCGGAGAAC CATTTTAAGG 
ATTTACCGCC TGGCGGAGGA GGCTTTGGAA TGTTGGGTAG ATGATGCCAA CCTGGAAGAG 
CTAGATAGGA AGGAAGGGAG TTGGCAAGTG GCGAGTGGGA TCTTGGGGCA AAGGAGGGAA 
GGAAGAAACG ACCTGTAACG CGTAACGCCC ATAATC 

 

Protein sequence

MTHPIQPPTR PHSANPLTLN PSLSIFPRPS SRPTIPRGAP MSSFGLVTKD AEDWEDAWDS 
SSDKEDGGEP SGMPMSMPGG GRKSRDDGEG IAASWASTSY THVTYPNSSP TRPALPQSKT 
FTEGVAPPAP GTSAINGALR SHGHGHAGGS RLPPGGAWEI VEPEEIIEEE QEPIKTGKEA 
VRVDVENILR DPLELLHSLS LDSPAISRAS SRSSSFPFFA SNDPLSSAPA SPSYTPTTPT 
AATNMKSRKD GMNRQRSVRS ERRREKFAKV LRGDEGGVDV GELRRLAWSG VPMEVRPIVW 
QLLLNYLPLP VQPRLTTLNR KRKEYTQLVD QYFGRGLSSL DQQIWHQIEI DVPRTRPGVP 
LWSCEKTQRS LERILYVWAI RHPASGYVQG INDLVTPFFE VFLSAYIDTD PESFDISHLP 
ESILSAIESD SFWCLTALLN GIQDNYISQQ PGIQRLVKRM SELIKRIDTP LATHFEEQGV 
EFMQFAFRWM NCLLMREISV KCTIRMWDTY LAEGTDAFSQ FHLYVCSALL VKYSDRLREM 
DFQEIIIFLQ RLPTQNWGDH DIELLLSEAY VLKTVWQGAE NHFKDLPPGG GGFGMLGR