| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNK00440 |
|---|
| Symbol | |
|---|
| ID | 3254401 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006680 |
|---|
| Strand | + |
|---|
| Start bp | 131800 |
|---|
| End bp | 133564 |
|---|
| Gene Length | 1765 bp |
|---|
| Protein Length | 467 aa |
|---|
| Translation table | |
|---|
| GC content | 49% |
|---|
| IMG OID | 638253538 |
|---|
| Product | expressed protein |
|---|
| Protein accession | XP_567613 |
|---|
| Protein GI | 58260406 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CGCATACTGA GGGGATATGC CTTAGTACGA CATGTCAAAT TCATCCTCTG TTAGAAATCC
TCTTCAGCGC GCCCATGCTC TCTCAGCCCA AGCATCTAGC CTTTTGGATT CCGATCAGCC
GTCGGCCCAA GCAATGAGCC AGGCCCTACA GGCTTACAGA GAAGCAGCCA GTCTATTTGA
AGCTTCTGCT GGTGATTTGG ATGTCGATGA GAGCACGAAG GTGACTTTGA AGTTGTTGAC
AACGCAGCAT CGCAAACTGG CAAGGGACCT CGAGCGGAGG ATTAGTATTG CTGCCAAAGG
GAAAATGGCC ACTCCTGTGA ATACGCGACT TGCTGGAATG CCCCCAAACC GGAGATATTT
CTCTGAAGGT TCACCTGCCA GAGGCTATCT CCCTGATAAC AAACAGGTCG CGGGCGGAAT
GACACCTCTG CGGGTTGACT CGAGTAGGTT TTCCGTGCCT TCCTCTCATG GACCAAGCTC
ATAAGGCTTT AAGCCGCGCA GCACTTATCA CATACTCAGG AGGTACCACC ATTCGCATAT
AGGCCTCCTC CAAATCCGTC CGGTTCTCAG CCAAATTCTG CTTCCATCTT CTCGCCATCC
GATGCTCCGT CACCTTTACA ATCCTCTTCG TCATCTTCTG AAGCGCCTGA GGAGTCTTAC
GTGCATTTCG GCGCTCCCCC GGATATAACC GACCCATTCA ATCGCTTTTG GGCCATGCTG
GATAATATGC TGGAAGATAT ATCTAACCCC ATTGCTTTTG CCAGTGCACC TCTTGATACA
CTAGGTCCAA CCATTCCACA ACCGAAAAAG TCACAGGAGA AACGCAATAG CAAGAGTGGT
AAAGAAGAAA AGAGAAAGGA AGAGTCACCA TCACCTACTG ATTCCTTTTA TTTGGTTCAT
CCAAAGGGCA AGATGACACC CGAAGGATCC GAGGATGGGG ATAAACCTCG CGGTAACCCG
TGCGTTAATA TCGATGTACA AGTCCATCAA ATAGTGCTGA CATACCGTTG TAGAGCCCCT
TTAGCCAAAA CGCCAGAGGA ATTGGCCCTG GAAAATACAT CTTTACGGCA TTCCCTCGAC
ACCCTTGCTT CACACACTCA ATCTCTAGAA CAGACAAACC GCCTTCTCAA AATCCAGTTA
GAAGAGCGGG ATAAGAAGTT TTTGGCAGCC ATGGCAGGTG TAAAGAAGGA AGCTGCTCGG
GCCAAACAAG GACAAGAGCT GTGGCGCAGT CAAGTCATGG CTGGATCTAT CATACCGGTT
AGAGCGCCGA GGGTGGACGG AAGTCCGATT AACAGTGTTC CTGGGTTGAA GGATGGGCCA
GGATCGGATA GCACGGGTCA GTTCCTTACA CATCATTCAA AGCGACAGAA TGTCCTGACA
TATCGCTGCA GTCTTGCGCA AGAGGATCAA AGAATTGGAG GAGGAAGTGA AGGCCCTGAA
GCTCGAATCA GAGAAGCAGA AAAACCACAT TGAAAAGTAC AAAGGAAAGG TGGGTCCGAT
TTGTCTAAAC TCTGGAGCGC GACAGGAAGT TGATATGGTC TTAGTTCGAA AAGCTGAAAG
CAAATGCGCG AGCCAAGAAG GAAGCTAAAT TAGCTGCAGC TGCCGCTGAA GCCACCGCGC
AAGGACAGAA TTCTTCTACC CCGACATAAA GCTGAACGTC TTAGACAACT GCAGCATCGT
ATGATTATCA GCCATCTCAT CTTGTAATAC GGAATTGTGT TTTCTCTGGC ATAGAACCAG
TGATGTTGTA CTATCTTTAC AGGAA
|
|---|
| Protein sequence | MSNSSSVRNP LQRAHALSAQ ASSLLDSDQP SAQAMSQALQ AYREAASLFE ASAGDLDVDE
STKVTLKLLT TQHRKLARDL ERRISIAAKG KMATPVNTRL AGMPPNRRYF SEGSPARGYL
PDNKQVAGGM TPLRVDSTAQ HLSHTQEVPP FAYRPPPNPS GSQPNSASIF SPSDAPSPLQ
SSSSSSEAPE ESYVHFGAPP DITDPFNRFW AMLDNMLEDI SNPIAFASAP LDTLGPTIPQ
PKKSQEKRNS KSGKEEKRKE ESPSPTDSFY LVHPKGKMTP EGSEDGDKPR GNPAPLAKTP
EELALENTSL RHSLDTLASH TQSLEQTNRL LKIQLEERDK KFLAAMAGVK KEAARAKQGQ
ELWRSQVMAG SIIPVRAPRV DGSPINSVPG LKDGPGSDST VLRKRIKELE EEVKALKLES
EKQKNHIEKY KGKFEKLKAN ARAKKEAKLA AAAAEATAQG QNSSTPT
|
|---|
| |