| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNK00360 |
|---|
| Symbol | |
|---|
| ID | 3254492 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006680 |
|---|
| Strand | - |
|---|
| Start bp | 109043 |
|---|
| End bp | 110694 |
|---|
| Gene Length | 1652 bp |
|---|
| Protein Length | 385 aa |
|---|
| Translation table | |
|---|
| GC content | 48% |
|---|
| IMG OID | 638253530 |
|---|
| Product | autophagy-related protein, putative |
|---|
| Protein accession | XP_567605 |
|---|
| Protein GI | 58260390 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.941753 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACAACC CACTTTTAGC TATCCAAGTA AGTCCTAGCA CGAGTTTTGA TAAATGCACT
GCTAATCCAT ACATGTAGAG TCAGTACTGG GCTGTAAGAG ACTACCTCTC TCCGGTACGC
CCTTCTCTGT CTTTGCCACC CAGAATGTTG AATACTTAAC CGTGCTGCTA TAGGTCCTTA
GAGAGAGTAA ATTCAAGGAG CACGGTAGGA TCACTCCAGG TACGTGTGAT GGATCATGAG
AGAGGCCCGA GGTGATTGAG ATGAATAGAG GAATTTGTTG CTGCCGGTGA CTTCTTGACT
TTCAAGTTTC CGGTTTGGCA GTGGTACGTC ACCTGTAGCC TATAAACTAT GACTGGCAAG
CTAAAGGTTG GCTGTAGGGA GAAGGGAGAA TCATCCAGGG CAAGAGACTT TTTGCCCCCC
GATAAGCAAT ACTTGGTCAC CCGTAACGGT GAGTCCTTCG CATCCGAGCT TTACCAAGTG
CTAACCATGA ACTACCAGTC CCCTGTCTGC GACGAGCAAC GGCTGTAGAC TATACAAATG
CCGACGAGGA TGCTGAGAAG CTACTTAGCT TCCTGGACGA TGTCTGCCTA GTCCTTGACG
TAAATAAGAT CACAAACTGA CATCTTGGTG TAGGCGGAGG AAGCTCCAGG TCCTGATGAT
GACTGGGTAG CAACCCATAT CAACCGTTCC CCACCCCATC GCCCTACAGA TATGGACGAA
ATTCCTGATA TTCCCGACTC TCCCACTACC GCACCCACTC GCGAGATGGC CGGGCTTAAT
GTTTCTTCTG GTGGCAAGTT GGAGGAGGAC GAGATTCCTG ATATCGATGA TATCCCCGAC
ATGGATGAAG AAGGGTTGGA GGATTTGGAA GATGATGCAG CAGTCAGGAT TGTGCATCCC
AGCGAGGCTG AGGTCAATTC GACGGCGGGG AAGAACCTCC TTCAAGTGAG GACATATGAC
TGTATTATCA GCTATGATAA GCATTATCAA ACTCCGCGAT TCTGGTTGTT TGGTTATGAC
GAGGTAAGTT TATTTATCTG CAGTTGCTTG ATATTCAATT CTCATATGAA AAACATAAAG
CACAAAAACC CTCTCACCCC TGCTCAAGTA TTCCAGGACG TTCCAGCCGA CCATGCATTT
AAGACGATGA CAATGGAATC CTTCCCCCAT TCTGGTGCAC AGCTTGCGAG CGTACACCCT
TGCAAACACG CATCCGTCAT GAAAAAGTTT ATCGACCGTA TGGAAGCTGC CCAGGGTCCA
GCGCCTACTG CTGAACCCGA AACGATTTCG TCCACGTCTG GCACTAGTGG AAGCGCAGGT
GGGAAGGAAG AGAAGGAGAA AAAGAAGAAG TGGGGTTTGG GCAGCATGGT GAGAAAGGTG
ACTGGTGGAA GCGTGCCCAA GGTGGAAAAG GATAAGGATG AGGTCGTCAC CGGTGTGCCC
GTGGATTTCT ATCTCGTCAT TGTGTGTTTT TTCTTTGTTA TCGAATTAAT CGTTTGACTG
ACAGGAAGTC TGTAGTTCCT CAAGTTCATC GCGAGTATCG TGCCTACTAT TGAGGTAGAC
AGTACTACTT CCACTGCTCT CTAGTTTGTG GAAACCCTTC AATGTGAAAA AGGTGATGAT
GAGAAAAGAG AAGATTTGTA TATATCAATG CA
|
|---|
| Protein sequence | MNNPLLAIQS QYWAVRDYLS PVLRESKFKE HGRITPEEFV AAGDFLTFKF PVWQWEKGES
SRARDFLPPD KQYLVTRNVP CLRRATAVDY TNADEDAEKL LSFLDDAEEA PGPDDDWVAT
HINRSPPHRP TDMDEIPDIP DSPTTAPTRE MAGLNVSSGG KLEEDEIPDI DDIPDMDEEG
LEDLEDDAAV RIVHPSEAEV NSTAGKNLLQ VRTYDCIISY DKHYQTPRFW LFGYDEHKNP
LTPAQVFQDV PADHAFKTMT MESFPHSGAQ LASVHPCKHA SVMKKFIDRM EAAQGPAPTA
EPETISSTSG TSGSAGGKEE KEKKKKWGLG SMVRKVTGGS VPKVEKDKDE VVTGVPVDFY
LVIFLKFIAS IVPTIEVDST TSTAL
|
|---|
| |