| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNK00240 |
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| Symbol | |
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| ID | 3254610 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006680 |
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| Strand | - |
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| Start bp | 73600 |
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| End bp | 76677 |
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| Gene Length | 3078 bp |
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| Protein Length | 888 aa |
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| Translation table | |
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| GC content | 52% |
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| IMG OID | 638253518 |
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| Product | deadenylation-dependent decapping-related protein, putative |
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| Protein accession | XP_567731 |
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| Protein GI | 58260642 |
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| COG category | [L] Replication, recombination and repair
[R] General function prediction only |
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| COG ID | [COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.390509 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGTTAC CAGTACACCC ACACCTACAT CCGGGGTACT ATTCCCCTTC ATCGTCCTCT
TCACCTCTTG AATCCAACTC ATTCCCCGTA GTCGGTCCGG ATCAAGATGA TATAACCACC
GGCGACGATG AGGACAACAT GTTTAGAGAT ATGAGCTTTG ACGAGATCCT TGAAGATCTT
AACGCCAGGT TCTTAATAAA TCTTCCAAAA GAGGAGATGA ACTTGTTGAG AGTGTACTGG
CAAGCTGAAC AGGCGTGAGT TTTCGCTTTT CCCTTTCCCT GCGGTTCTGT CGCTGGATGC
AGTGATGGGT TGCGCGCTGA AAACAACCAC GCAGCCATTG GTTCTATGAA GATTATCTTC
GTCCACTGAA CCCCTCTCTC CCCTCTCTTT CCCAACGGCA ATTCACCCGG TTAATCATCG
AGTCATCACC GCTGTATAGC CGACTCGTAT CTGGGAGTGC TGTGGATTAT GAGAGTGTTT
GGGACGAATA CAAGTCGTAC AAGCGGATGG TCCCTTGTTG CGGAGGTATA CTTTTGAATA
AAGAGGGTGA CAAGGTGTTG CTAGTGAGAG GGTGGAAGTC AAATGCGGGA TGGAGTTTCC
CTAGGGGCAA GATCAATCTG GCTGAGAGTG AGGAAGCTTG CGCTGTCCGA GAGGTGAGTA
GGGTGGTTGG GTGTTGCAAT GTAACGCGCT GCGGAAGTGC TGACAAGGAT TTGCTAGGTG
GAAGAGGAAA CGGGTTTTGA TTTGACGGGG ATGGTCAACC CTGATGACAA GATCAAAACA
TATATCAACG CTCAAGAGGT TACCATGTTC ATTGTCCCAG GCATCGATGA GGCTACAGAG
TTTGAAACGC AGACGAGACA CGAGATTGGA GTTCGTTCTT GTCACAAACC GGACTGCGGG
TATGCTGACA AGCAATTTAG GCGATTGAGT GGGTCGCCCT TCAAGACCTC CCTACGTGGT
CTGGAAATAA GAGAGGTCCC AGAAAGACAG CAAAAGCCAA AAGATTTTAC AATGTAACCC
CCTTTGTCAA GTGAGCCTTG TCAATGACCC CGGGATATAA GGCTCTGCTG ACGCACTGTA
GTCCTCTCAA ATCATGGATG AAAGAGCACG GAATGGACCC TTATCCCAAA GCACGTCAAT
CGAAGCCTAC AGGTAAAAAC TCCTCCGTTT TCCACCGGGA CATCCAGCCT TTCCAATTTG
ACACCTTTAC CGGCTCTCCA TCCAACTCGC CGGTCCCTCA CGCCCCTTCT CCTTCACATT
TTCCTTCCCG TGGATCCTCA GCGTTGGACC AGCTTTTCAC AAAGTTCATA CATAAGCAAG
AAGAAGAAAT TATGGCACCT TCTCGAGCGG CGGTATTGGG TAGCGATAAC AACGCCGGTT
TGGAGAGATT GTTTGGCGGA CTTAACGTTT TGCAAGAGGA AGAAGATGCA TTGCGTTTGC
GCCAGAGGCA ACAGACAGAG GAAGAGATGA GGAAGAAGGA GGATGATGCG CTCGCGAGAT
TGTTGGGTGG GGTAGGAGGG GCGACTCCGC AGAAGGAGGC TCCTCAGCCC CAGCCTCAGC
CCCAGCCTCA GGGAAAGACT TTGAAGCAAA CCAATTTGTT GGCGATGCTA AATCAGAAAC
CTAGCGAAGC GCGTCCTGCT GCAAAAACGC AACCATCAAC CCAAACTCAA ACTCAGGCCC
AACCCCAACC CCATCACGAC AGACTTCTTT CCGTAATTTC CCCTCAAGCA CCCCCTTCTT
CTCTTCGAAG AAACGTCGCT GCTTTATCTG GGACTGGCAA TATGGCTGGA ATCAGAGACT
CTGACGCTGG TGTCGTCATT ACCACCTCTC AATCGAGCAC ACCGTCCGCT AACAGGTTAG
AAAGCGAGAG CGGAGAGACA GAGAGGCAAG CAAGGGCAAG GGCGCTGTTG GATATGACAA
TTGCAGGGAT AGGAGGCAGT CCGGCAACAG AAATAGGTTC GGCGCCAACA GCGGCGACGA
TGGCAACGGC GAGGACTGAT GGTGAACAAG GTAAACAATT AGTCTCACCT CCACTGGGGT
CAATGCAAAC GCAAAGCACC ATCCCACCAC AGTCTCTGCC ACCTAACCTC GCACGTCATC
CTTACGCACC CTATCCATCT CAGTCATCTT ACCCATCTCA TGAGCCGCTC TTGTCCCACC
CAGCCCCTCC GGCTCCTCCG GCTCATCCGT CCCTTCCACC CCATCCGGGA CACGGGCATG
CAAATATGAA CATGAACATG AATACCAATG CGACCCAAGC CCGACCACCT ATCATCGCCC
CACCGCCCAT GTCGATGCCT ATGCCAATGC CGATGAGCCA ATCTTACCGT CCCGCTGCCC
ATGTTCCTCA CCCCCACCTT ACTTCTCCGC AGAATATGCA GGGGATGTAC ATCAACCTAG
GCGCCCCTCA TGCACAGGGA TTAGCTCAAG TTCCGGGCCA AGGACAAGGA CAACAAGGAC
AAGGGTACTA TCAGACGTTC CCGGGGGGCT CACCGCCACA CACGCAGATT GGTTCCCAGC
CCATATCGGT AAACATGCCA GGACCAGGAC CAGGACCAGC GGTAGGCTAT TACAACAGTC
CGCCCGTGCC CCAGGGTCAA GGAATGTTGC CTCATCAGGT GAATGTGAAT GTGAATGGGC
AACAGCAGCA TCAGCATCAA CATCCGCTCC CCATGCCGCC TATACATAAT CAAGGGTTAC
CTCCCCAGTT GGGTCAGGTG GGTCAGTATA ATCGCGTTGG ACAAATTGGG CAGAGTGGGC
AGAATGGGCA GAGGACGTTG CCTACAAAGT CATCATTCGC GGGGGTTCAG ACGCAGGGGC
AGGCGGCGAA TGTGTACCAC CCTATACCCC GCCCGCCTAT GGGAGCTGCA GGGTTGTTGG
CGATGCTCAA CGGGGATAGG CAAAGTAAAT GATAGGAAAG AAGAGTTGAG ATGGACGTGG
ATTAGAAGGA CAGAGATGGA CGTGGATCTG CAAGGTTGAA GGGACGAATG TGGTTAGTAA
ATGTCTCCAG TGATATGCTT TGTGGCCTCT TTTTGGATGC TGTATAGTAT GGCAATGAAG
AAGAGTATGA CGGTAGGG
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| Protein sequence | MPLPVHPHLH PGYYSPSSSS SPLESNSFPV VGPDQDDITT GDDEDNMFRD MSFDEILEDL
NARFLINLPK EEMNLLRVYW QAEQAHWFYE DYLRPLNPSL PSLSQRQFTR LIIESSPLYS
RLVSGSAVDY ESVWDEYKSY KRMVPCCGGI LLNKEGDKVL LVRGWKSNAG WSFPRGKINL
AESEEACAVR EVEEETGFDL TGMVNPDDKI KTYINAQEVT MFIVPGIDEA TEFETQTRHE
IGAIEWVALQ DLPTWSGNKR GPRKTAKAKR FYNVTPFVNP LKSWMKEHGM DPYPKARQSK
PTGKNSSVFH RDIQPFQFDT FTGSPSNSPV PHAPSPSHFP SRGSSALDQL FTKFIHKQEE
EIMAPSRAAV LGSDNNAGLE RLFGGLNVLQ EEEDALRLRQ RQQTEEEMRK KEDDALARLL
GGVGGATPQK EAPQPQPQPQ PQGKTLKQTN LLAMLNQKPS EARPAAKTQP STQTQTQAQP
QPHHDRLLSV ISPQAPPSSL RRNVAALSGT GNMAGIRDSD AGVVITTSQS STPSANRLES
ESGETERQAR ARALLDMTIA GIGGSPATEI GSAPTAATMA TARTDGEQGK QLVSPPLGSM
QTQSTIPPQS LPPNLARHPY APYPSQSSYP SHEPLLSHPA PPAPPAHPSL PPHPGHGHAN
MNMNMNTNAT QARPPIIAPP PMSMPMPMPM SQSYRPAAHV PHPHLTSPQN MQGMYINLGA
PHAQGLAQVP GQGQGQQGQG YYQTFPGGSP PHTQIGSQPI SVNMPGPGPG PAVGYYNSPP
VPQGQGMLPH QVNVNVNGQQ QHQHQHPLPM PPIHNQGLPP QLGQVGQYNR VGQIGQSGQN
GQRTLPTKSS FAGVQTQGQA ANVYHPIPRP PMGAAGLLAM LNGDRQSK
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