Gene CNK00170 details

Gene Information

• Locus tag: CNK00170
• ID: 3254438
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006680
• Strand: +
• Start bp: 53935
• End bp: 56245
• Gene Length: 2311 bp
• Protein Length: 448 aa
• GC content: 46%
• IMG OID: 638253511
• Product: Tubulin gamma chain (Gamma tubulin), putative
• Protein accession: XP_567730
• Protein GI: 58260640
• COG category: [Z] Cytoskeleton
• COG ID: [COG5023] Tubulin

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 0.585998
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CCATATCAAT TCATCGCCCA TATATAATTC TAGCTAAATA TCGCGGCCTA CGACGTGTGT 
CATCAATACC GATATAAGAA TTCTCGCCAA CCACGACTTA CCTCAGTTCC TGCAATATCA 
AGCTACGTGG GAAATCGGTG TCATTGTATC AAATCGAAAG CGATTGAAGA TAATCAATAG 
ATAGGATGGG AAGGGAAATA ATTTCATTAC AGGTGAGCCA CGAAGCTCTC CAAAGGAGGA 
AAAGCGTGGG CTAATCATCT GTAATGCAGG CTGGGCAAGC TGGTAACCAG AGTACGTATT 
TCTAACGAAT CAGACCTGTG ATAGTGCTGA CATCCGCCGT TATAGTCGGA GCACAAGTAA 
GTGATCTCCC TGGATTGCCC CATGTACCAT CGCCAGCCGG CTTCATCTAA CGTCCACCTG 
TAGTTTTGGC AAAAACTCTG TGCCGAACAT GGCATCTCCC CCCAAGGTGA CCTCGAAGAC 
TGGGCGGCCG ATGGGGGCCA GGGTGATCGT AAAGACGTTT TCTTTTATCA AGCAGACGAC 
GAGCATTATA TTCCTCGAGC GATTCTTATT GACCTCGAAC CTCGAGTAAG TACTTGATAT 
AATTGTCATC GACTTCAAAA GGAAATTTCT TGACAGAGAT ACTAGGTAAT CAACAGTATC 
CTCACTTCCC CATTCAAAGG TCTTTATAAC CCCGAAAACA TCTATGTATC AAAAGATGGT 
GGTGGCGCTG GTAATAACTG GGCGCAAGGT TACAGTGCGG GAGAAAAGGT CTATGATGAT 
TTGATGGAGA TGATTGATCG AGAAGCGGAC GGCAGTGATT CCCTTGAAGT GAGTTTCTTT 
TCCCATCCGA CTTTCTCGTT CCACTTGAGT TGACAGGAAT CTTGGTTTAG GGCTTCATGC 
TTCTCCATTC TATAGCAGGT GGTACAGGAT CCGGTCTCGG CTCTTACCTT CTCGAACGCC 
TCAACGATCG TTTCCCCAAA AAACTTATTC AGACCTACTC TGTCTTTCCA GAATCATCCG 
ATGTTGTCGT TCAACCTTAC AATTCTCTTC TCGCCACGAA GCGACTAGTA AACAATGCCG 
ATAGTGTGGT GGTGCTGGAT AATGCCGCTT TGACGAGGAT TGCGGCGGAT AGACTTCATA 
TCCAAGACCC AAGCTTTGTA CAGACTAACC AGTTGGTGAG TTTGACCTTT ATCCACTGGG 
TCCTGACCGA CCCGTGAAAA GTTTACTGAC AAGTACATCT TCTAGGCGGC AACAGTGATG 
GCAGCGTCTA CCACAACCCT TCGTTACCCT AGTTATATGA ACAATGACCT AGTAGGCATC 
ATCGCCAGCC TTATCCCCAC ACCTAGATGT CATTTTTTGA TGACCTCCTA TACTCCATTC 
ACTGGCGACG AAATTGACAA GGTACTTCCT CTCCTTCCTC TTTTTTTCTT CTGGGGAATC 
TTTCACCCTA CTTACATCAA AACTTCTCTT TCCGTAGGCT AAATCCATTC GCAAAACCAC 
AACTCTCGAC GTCATGCGCC GCCTTCTCCA ACCTAAAAAC CGCATGGTCA GCACGACATC 
CACCAAATCA TCCGCCTACA TCTCTTGCCT CAACATCATC TCTGGCGATG TTGATCCGAC 
AGATGTGCAT AAATCATTAT TAAGGATAAG GGAAAGGCAG CTTGCAAACT TCATCCCATG 
GGGACCAGCG AGTATACAAG TGGCGCTTAC GAGGAAGAGG GGTATGGGCG CGGGAAGTAA 
TAGGGTTAGT GGAGTTATGA TGGCGAATCA TACCAGTATG GCTAGTGTGC GTCCCTTCTT 
TTCCCTTTTT GCTTCTCCAT CTCCTTCTTA CTTTCAACTG ACGCATTTCG CTTCACGCAT 
CTCATTCTTT TAAAACAGTT GTTCAAGCGA ATGCTCCACC AGTACGACAT GCTCCGCAAA 
CGTAACGCCT TCCTCGAACA ATACAAAAAA GAAGACATGT TTGCCAATGG GCTTGAAGAG 
TTTGACGATG CGAGAAGGGT GGTGCAAGAA TTGCAGGAAG AATATTTGGC GGCGGAACGA 
CCGGATTATA TCGATTTTGG GGGGGAGTAA ATGAGCAGCG CATAGAGAGA GAATAGAGAG 
TAGGAGTTAA GAGCTTGAAG GTTGGAGGGG GAAGATGTGG AGCCGTGGAG CCGTGAAACT 
GCGGACTGGA TGCGAAGATC GTAGTAATGG GATTCATAAG AGGTGATGGT GGATAGATGT 
ATTTGGGATT TGAGGCTTCC TTTTTATGTA CGATAATATT CACATCCTGT AATCAAAAGG 
GGATGATATC GATGTGATTG TATATACATA C 

 

Protein sequence

MGREIISLQA GQAGNQIGAQ FWQKLCAEHG ISPQGDLEDW AADGGQGDRK DVFFYQADDE 
HYIPRAILID LEPRVINSIL TSPFKGLYNP ENIYVSKDGG GAGNNWAQGY SAGEKVYDDL 
MEMIDREADG SDSLEGFMLL HSIAGGTGSG LGSYLLERLN DRFPKKLIQT YSVFPESSDV 
VVQPYNSLLA TKRLVNNADS VVVLDNAALT RIAADRLHIQ DPSFVQTNQL AATVMAASTT 
TLRYPSYMNN DLVGIIASLI PTPRCHFLMT SYTPFTGDEI DKAKSIRKTT TLDVMRRLLQ 
PKNRMVSTTS TKSSAYISCL NIISGDVDPT DVHKSLLRIR ERQLANFIPW GPASIQVALT 
RKRGMGAGSN RVSGVMMANH TSMASLFKRM LHQYDMLRKR NAFLEQYKKE DMFANGLEEF 
DDARRVVQEL QEEYLAAERP DYIDFGGE