Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNJ02940 |
Symbol | |
ID | 3254109 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006679 |
Strand | + |
Start bp | 915298 |
End bp | 917971 |
Gene Length | 2674 bp |
Protein Length | 596 aa |
Translation table | |
GC content | 46% |
IMG OID | 638253443 |
Product | histone deacetylase, putative |
Protein accession | XP_567573 |
Protein GI | 58260326 |
COG category | [K] Transcription |
COG ID | [COG0846] NAD-dependent protein deacetylases, SIR2 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.211109 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GCCTTTAGCT TTCTATTGGC ATATATCTCG ACATTCCCGC TACCTCGAAC CCGTTGGCTT AATGTCACAG CCAGATCTGT CGCAATATAG CCTGAGTGAA GAAGTTCCTC TGCCACCAGC ACAAGAGATC AGGCCCGGAG ACACGTATCA GATAGACTCC GAGGAATACG ATTCCGATCA AGAACGCGAT AATTTGTCTG ATGGAGAATA TGATAAATTA GTTGAAGAAG GTCGGTTTGG CTCCTCATGT GTTTCCAATA GGACACCTCT CAGGGTGTTT GTAACCCATA CAGATATGCT ACATTGGCGG TGCTGACAAA TGCTGCCTGT AGCGGAGAAT GGATACACTG ATGAAGAGAT GGATCAATAT ACCCGCCAGC TCAAAGAGAA TGGCATCGTA AATTTCTTGA GAAGCTATCT AACGTTAACA GAGGACGGTG AGATGCGATC GCTTCGAAAA TTGTTATTAG GTTTTGGTCT TGTTCCTGTA GGTCGCCGTC GTTTCGTGAT TTCAGTCAAA GGGCAAACTC ATGGCCGAGC AGCCGCTTTC TCTTCGGTCT CCCGAAATTC CCGATATTCA ATTACTCCCC TTTGCCAAAG TTGCCCTTTC CAGAATTTTG CGCAGACGTG AACGTCTTCG AGACATCTCG TCTTTAGATG ATGCTGTCTC CTTACTAGCC AAGTCTAAGA AGATCATTGT GCTCTCTGGG GCAGGAATCT CGACTTCTTG CGGTATACCC GACTTTCGTT CAAGTACCGG TCTGTACGCC CAGCTACAGG AAGAGGGAAA ATATGAGCTG GACGACCCGC AACAGATGTT TGACATCAGA TACTTTAGAG AAAAGCCAGA GGTTTTCTAG TGTGTGCCAT TTGTAGCTAA CATTGTATAT ATCATTGACA TTGCTTGGAT AGCTCCTTCG CCAAGCAAAT CTATCCCAGT AACTTTGTCC CCAGCCCTTG TCATAGATGG ATCAAGATGT TAGAAGATCG AGGTGTTGTA AGTTTATATA TTGATACGTC CTTGAATTTG GCATTCTTAC TTCTCACAGC TTTTGAGGAA CTATACACAA AACATAGATA CTTTAGAAAG CTTGGCAGGC GTGGAGAGAG TTTTGCAGTG TCACGGTTCC TTCAAGACTG CTTCTTGCCT TGTAAGCTCA ACTTTCATTG AAATCGTAAT TCTTTGCTTG CTGATTACTG CTATCGCTAG CGTTGTAAAC AACGAGTGCC AGGTCGGACT ATAGAACCGT ACATAATGTC CCAGCAAATT CCGTACTGCG GCACTTGCCG TGAAATATGT GCTGCTGAGC GAGAGGCAAG AAGAGCCTAT AGAGAAAAGT TGAAAAAGTT GAAAGCGAGG ACTAAAGGGA AGGGTAAAGC GGATGAGTGG GATGATGGCG ACGACGATGA CGATGATGAG AGTGCAGATG AATGGGGAGG AGGTGAACCC GGTATCATCA AGGTGAGTAG AATAATCTGC GATGAAGTGA CATGCTCCGG CCAACATAAT CATACAGCCA GATATAACCT TTTTCGGCCA GGCACTCGAT TCAGAGTTTG ATGAATGTCT ATTTAAAGAT CGCGAAGAGG TGGACTTGCT TGTTGTTATA GGTACCAGTT TGAAGGTGGC GCCAGTGAGC GAAGTACTCA GTGAGTTTTT TTCTGTTTCT TTTTTTGCTA TTAGCAGAGA CTAAAATGCG AAAATGCGAA ACTAAACAAA CTTTTTTCAG CACACATACC GCATTCTGTA CCACAAATAT TCATCAATCT CACTCCCGTG TACCATGTAC AACCAGACGT AAGTGTTTTT TCTTTTCCGC CTAATCTTCA CCTCTCGGTA GTTATTAACT TTTGTCCTTG TCTAAAGGTA TCTCTCCTGG GCGATGCCGA CAGCATAGTG ACCTATCTTT CCAGTAGACT AGGCTGGCCG ATCCCTCCTC CGACAGTACT TCCTACGCCA CCGTCTGCCG TTGGCGAGGG CAAGAGTGAG GACACAGCTC CTGCAGGCCA AAAGGATGAA ATCAAGGTCG AGCGCGCTAC TCATGTGGTG ATCCCCCCCG AAGAAGCACA GTGGCTCACC GTCGATGAAG AGTAAGTGGC CTTTTTTTTT TTTTTCTTCT GTGAATTTGA ACGTAATATG GTGTAAAGCG GGCTTAACAC TTTTGTGGTC AGACGCCATT TCCACCTTCT CCGCCGAAAA GGTGATCCCG CCATCCAGGC CGAGACCACC GTCGTCCCTC CAGTCGTCCC ATCCTCTCCA AAGCCCGAAC ATTCTCCCCA ACCTCGACCT CAATACACCG ACGACTCGGC CAAACAACCG TCTTCTCCAC CTCCGGTCCC TATGCACGTA GGCGAGGCAG AGGAAGGCTA CGTCTCCGAT GAAGAAGACG AAGCTGATGA ACCGCCTAGA AAGCGATCAA AAGTGGTGGA TAGCCTGCTT GGGAATGCAA GTTGGTGAGG ACTTGTTTCA GGTCCAATTT AAAATTGCTC TTTTCTCGTG GGGGTCTGCC GTTGGGTTGC TTGGTGTTGC TAATGTTAAT GTTGTCAAAT GTTGTCTAGA GAAGCCGATG TTTGATTTAA ACGACGGCCA TTGTAATCAT TTCCCCCAAA GACACGTTTT TTTTCTTCTT CTTTGGTATG TTGTGTAAAC GGCTGTAAAT CATGCACGGT ATGT
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Protein sequence | MSQPDLSQYS LSEEVPLPPA QEIRPGDTYQ IDSEEYDSDQ ERDNLSDGEY DKLVEEAENG YTDEEMDQYT RQLKENGIVN FLRSYLTLTE DGEMRSLRKL LLGFGLVPPL SLRSPEIPDI QLLPFAKVAL SRILRRRERL RDISSLDDAV SLLAKSKKII VLSGAGISTS CGIPDFRSST GLYAQLQEEG KYELDDPQQM FDIRYFREKP EVFYSFAKQI YPSNFVPSPC HRWIKMLEDR GVLLRNYTQN IDTLESLAGV ERVLQCHGSF KTASCLRCKQ RVPGRTIEPY IMSQQIPYCG TCREICAAER EARRAYREKL KKLKARTKGK GKADEWDDGD DDDDDESADE WGGGEPGIIK PDITFFGQAL DSEFDECLFK DREEVDLLVV IGTSLKVAPV SEVLTHIPHS VPQIFINLTP VYHVQPDVSL LGDADSIVTY LSSRLGWPIP PPTVLPTPPS AVGEGKSEDT APAGQKDEIK VERATHVVIP PEEAQWLTVD EERHFHLLRR KGDPAIQAET TVVPPVVPSS PKPEHSPQPR PQYTDDSAKQ PSSPPPVPMH VGEAEEGYVS DEEDEADEPP RKRSKVVDSL LGNASW
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