Gene CNJ01580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNJ01580 
Symbol 
ID3254110 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006679 
Strand- 
Start bp461986 
End bp463198 
Gene Length1213 bp 
Protein Length184 aa 
Translation table 
GC content46% 
IMG OID638253316 
Producthypothetical protein 
Protein accessionXP_567336 
Protein GI58259847 
COG category[K] Transcription 
COG ID[COG1095] DNA-directed RNA polymerase, subunit E' 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCGTCC TCATCGGTGT GCGAGTGAGT CGTATCTGGC TTAGACAGGT GGAGGAGAAC 
CGCTTACCCT CCTATGGCGC TGTAGGATAC CGTCCCCGTA GCCCCGAAAA CTTTCGATAT 
TCCGCCTGTC ACTACCATAA CAGATGCATT GAATACCAAG TATCAATCCT ATTTGCATTG 
ATGGGGTTCA ACTGATGCGA ATTGTTTTTT AGATACGCAA ATAAGCTTGT TCCAGAAAAG 
GGTTTGGCCC TCTCAGTGTT CGATATCCTC ACAGCTGAAG ATGGCAAAGT GACCTGGGGA 
AATGGCTTAA TGTATTATAA GGGTAGGTAG TGATTTGATC ACAGTGGAAG TTCTCTCGGC 
AACTTACACA ATTTCAGTAT CTTTCAGATT AATGCTCTTC GCACCTTTTG TTGGAGAAGT 
CATCGTGGGC CGGGTTCTCT CAACTACCAA GACTTATATT CGAGGTAAGC ATGTCGTATA 
ATTGCTGTTC TTCTAGTAAC CTGGATTTTC TACAGTATCT CTGGGATTCT TCCAAGATAT 
CTACATTGTC CCTTCGCTTT TACCTCCGAA CTCCGCCTAG TATGTTCGAT GGGTCAGCCT 
AATGTTCAGT TGCTCACGGA TTATATCCAG CGATCCTCAA CAAAAAGCAT TTTTCTGGGT 
GGCTATTGAT GATGAGTCGA CCTTAACCCA AGAACAACTG TTAAATACCG TCATTTCTGG 
TGCGTGTTTC CCCTTCCTTT CCCAAATCTT AGGCTTGACG CTAATCTTTC TGTGTAGAGA 
GATTATATAT AGATCTAGGA GAGGCGATCC GTTTTCGTGT AGACTCCATC GAATGGCAAG 
ATGTGCGCCC TACACCCCAG GCCATGTTGG CGGAGATGAA CGGCGAAGCG GTGGAGGGGA 
AGGACCCCAT TGAGAAGGCA GGCTTTAAGA TCTTGGTATG CTCAGGCCTT AATTCCAACA 
AGCTCATTGA CTGACAATTG TCATGTAGGC GACAATAGCT GAATCAGGTC TTGGTGTGAC 
AGCTTGGTGG CCTGGGCGAG AGGAAAATGA GGAGATGTAT GAGGAGTAAG GACATTAGAT 
CTTGCCGGAC CAGAGGATAT TGTGCAAGCA GAGGGTTACA GGTTCTTGAT CTCGAATAGA 
GACTTACTCG CGAAAATAAG AGGCCTCAGA GAGCACACGC AGTCAGAGTA TCACAATACA 
CCTTACGACG CAT
 
Protein sequence
MFVLIGVRLV PEKGLALSVF DILTAEDGKV TWGNGLMYYK VSFRLMLFAP FVGEVIVGRV 
LSTTKTYIRV SLGFFQDIYI VPSLLPPNSA YDPQQKAFFW VAIDDESTLT QEQLLNTVIS 
DSIEWQDVRP TPQAMLAEMN GEAVEGKDPI EKAGFKILAT IAESGLGVTA WWPGREENEE 
MYEE