| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNJ01000 |
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| Symbol | |
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| ID | 3254171 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006679 |
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| Strand | + |
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| Start bp | 291598 |
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| End bp | 293252 |
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| Gene Length | 1655 bp |
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| Protein Length | 407 aa |
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| Translation table | |
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| GC content | 47% |
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| IMG OID | 638253257 |
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| Product | endopeptidase, putative |
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| Protein accession | XP_567479 |
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| Protein GI | 58260138 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1222] ATP-dependent 26S proteasome regulatory subunit |
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| TIGRFAM ID | [TIGR01242] 26S proteasome subunit P45 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.174287 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CGTTTTCCAA CCTAGGCACA ACGCTCAGCG CCGAAACTAT ACCTATAAAC AGTACAACAC
ATTACAGAGA GGAATAATGG CAGTGGCGAC TCAGAAGATG CCCAAAGCTC CAACATCTGC
CCCTGGAGGT AGCATCAAGG TATGTCCTGA TTGTTCTATT TCTATGCACA AGGAGGTTGG
ATTCTAACAA TTGTAATTAG ACCTACTATC AGAACAAGAT CGAAGCTGCC GAGCTTGACA
TCACCCGTAA AACACAAAAT CTTCGCCGTT TGGAAGCTCA GCGTAATGCC CTTAACGCTC
GAGGTTAGTG ATAGCCAGTC TTATCATATT TGACAATCGA AGATGGCTGT CGTTGGCCCA
TATGTGCACT CGTAACTGAT AAGCTGCATA GTGAGACTAC TTCGAGAAGA ATTGCAGGTT
TTGCAAGAGC CCGGAAGTTA TGTCGGTGAG GTCATCAAGG TGATGGGTAA GAAGAAGGTT
TTGGTCAAGG TGCAGCCTGA GGGCAAGTAC GGTAAGTAGC AATGATCTCT TACCAGAAAA
AAAAAAGAAA ACAGTGCTGA GCATGTCGCA GTGGTTGATT TCTCCCCCGA TATCCCTATC
TCTGCCCTTA CCCCCAACAT CCGAGTTTCC CTTCGAGCCG ATTCTTACCT CCTCCATTCC
ATCCTTCCCA ACAAGATCGA CCCCCTCGTC TCTCTCATGA TGGTCGAAAA GGTTCCTGAC
AGTACATATG AGATGGTTGG TGGTTTGGAC AAGCAAATCA AGGAGATTAA GGAAGTTATC
GAGTTGCCTG TTAAGCACCC CGAACTATTT GAGAGTTTAG GTATCGCTCA GCCCAAAGGT
GTCTTGCTCT ACGGTCCACC GGGAACGGGT AAGACCCTTC TCGCTCGAGC GGTCGCTCAT
CACACCGACT GCCGATTCAT CCGAGTATCT GGTTCGGAAC TTGTACAAAA GTACATCGGT
GAAGGTTCCC GAATGGTGCG AGAGCTGTTC GTGATGGCTC GAGAACATGC GCCGAGTATC
ATTTTCATGG ATGAAATCGA CTCTATTGGA GGTTCGCGAG GAGAAGGAGC TGGTAAGAGT
GGAGACTCGG AAGTGCAGAG GACAATGATG GAATTGTTGA ACCAGTTGGA TGGATTTGAG
GCCACGAAGA ACATCAAGGT TTGTCTCTTT ATAGTGGGAA CTCTTGTGCA GGGCTGACTC
TGATACAGGT TATCATGGCC ACTAACCGTA TAGACATTCT CGATTCCGCT CTCCTGCGTC
CGGGACGTAT CGATCGTAAA ATCGAGTTCC CTCCTCCCAA CCCCGAGGCT CGAATCACCA
TTCTCAAGAT TCACTCTAGA AAGATGTCTC TCCAGCGTGG TATCAACTTC AGGTCATTGG
CAGAAAAGAT GGGCAACTGT TCAGGTGCTG AAGTTAGGGG TATCTGTACC GAAGCGGGTA
AGTGCCTTTG TCTTGTTTAA AGTTTGAGAG ACAGCGCTGA TGATGTCGTT GCAGGAATGT
ACGCACTGCG AGAGAGAAGA CAATATGTCG GTCAGGAAGA CTTTGAGATG GCGATAGCAA
AGGTTTTGAA GAAGAATGCC GACAACAACA TGAGCGTGAA CAAGCTCTTC AGTTAGAAGT
TTTTTTGATA GTCAGCTATG AAACGTTTTG CATTT
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| Protein sequence | MAVATQKMPK APTSAPGGSI KTYYQNKIEA AELDITRKTQ NLRRLEAQRN ALNARVRLLR
EELQVLQEPG SYVGEVIKVM GKKKVLVKVQ PEGKYVVDFS PDIPISALTP NIRVSLRADS
YLLHSILPNK IDPLVSLMMV EKVPDSTYEM VGGLDKQIKE IKEVIELPVK HPELFESLGI
AQPKGVLLYG PPGTGKTLLA RAVAHHTDCR FIRVSGSELV QKYIGEGSRM VRELFVMARE
HAPSIIFMDE IDSIGGSRGE GAGKSGDSEV QRTMMELLNQ LDGFEATKNI KVIMATNRID
ILDSALLRPG RIDRKIEFPP PNPEARITIL KIHSRKMSLQ RGINFRSLAE KMGNCSGAEV
RGICTEAGMY ALRERRQYVG QEDFEMAIAK VLKKNADNNM SVNKLFS
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