Gene CNJ00930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNJ00930 
Symbol 
ID3254058 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006679 
Strand
Start bp270445 
End bp271345 
Gene Length901 bp 
Protein Length252 aa 
Translation table 
GC content51% 
IMG OID638253250 
Productconserved hypothetical protein 
Protein accessionXP_567473 
Protein GI58260126 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones53 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCACAC CTCGTAAGAT CGCAGTCATC CTTGGCACAG GGCCCGGTCT GGCAACATCC 
ATCGCATCTC TACTCACCCC CACCCACTCT CTCGTTCTCC TTTCTCGATC ACTCCCTGGT
TCGCTCTCTT CCCTCCCTCT TCCCAAGATC GACCCTTCCA ACATCCTTGC TCTCTCTTCC
GATGGCTCTC CAGACTCTTT GAAGATTGCC TTTGAGGAGA TGGACAAGAA GTGGCCCAGT
GCCAGGGTAG ATGTGGGAAT CTACAATGTA AACGCGAAAT TCGACTTGAG GGGGTTCTTG
GAAAAGTCGG AAGCGGATTT GAGAACTGGG CTTGAAGCTG GTGTGGTGAC CGGATGGAAC
TTTGCCCAAG CTATCATCCC TCGCTTCCTC GCCAACCCCG CTCCGTCGAC CTTGTCGTCT
CAGGACAAGG CATCCAGAGA AGCGCGTGGT ACGCTTCTCT TTACAGGGGC CACCATGTCA
CTCAAAGCAG GTGTACAGTT TTCATCGCTT GCGCCCGGGA TGTTCGCCCG TCGTGCACTC
GCTCAATCGC TCGCGCGTGA ATTTAGCCCC CAGGGAGTGC ACGTAGCACA TGTGATAATC
GATGGGGTTA TGGACACCCC TCCTGTGCAG CAGTGGCTAG GTGAGGATAC GGAGGGCAAG
AGGATAAGGA CAGATGAGGC GGCGCAGGTG TACTTGGATT TGATCAACCA GAAAAAATCG
GCTTGGACTC ATGAGATTGA TTTGAGGCGA GTGGTTTAAT TATTTTGTTT GGTGCTCAAA
AGAATCTAAA CTAATAATGA TATTAGGCCG GATATTGAGA AGTGGTAAAC TATCAGATAC
ATCGTAGAGA AAATTGACGA AGACCAAAGT GTGATCTGCA AATATGCCAT GTATACACCA
A
 
Protein sequence
MSTPRKIAVI LGTGPGLATS IASLLTPTHS LVLLSRSLPG SLSSLPLPKI DPSNILALSS 
DGSPDSLKIA FEEMDKKWPS ARVDVGIYNV NAKFDLRGFL EKSEADLRTG LEAGVVTGWN
FAQAIIPRFL ANPAPSTLSS QDKASREARG TLLFTGATMS LKAGVQFSSL APGMFARRAL
AQSLAREFSP QGVHVAHVII DGVMDTPPVQ QWLGEDTEGK RIRTDEAAQV YLDLINQKKS
AWTHEIDLRR VV