Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNJ00880 |
Symbol | |
ID | 3254340 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006679 |
Strand | + |
Start bp | 253473 |
End bp | 255618 |
Gene Length | 2146 bp |
Protein Length | 490 aa |
Translation table | |
GC content | 46% |
IMG OID | 638253245 |
Product | protein-vacuolar targeting-related protein, putative |
Protein accession | XP_567468 |
Protein GI | 58260116 |
COG category | [Z] Cytoskeleton |
COG ID | [COG5277] Actin and related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CTTTCAACTC ATAGTTTACA CGCATCTGAC AACCCAGTAC TGTGGCCCTG GCCTTCACAA TAATGGCCAC ACCTCCGGTC CTTATAATAG ACAATGGGGC TTACGAGATC AAAGCGGGTA TATCGGGAGT CGATTGGGAG CCAAGGTGCG TAAACTGTCT TTCAGGACTT TTGATGGCGA CTGAACTGAG CTGATTGTAT TGTAGAGTAT TGCCCAATTC CATAGCTAGA TCGAGGACTG AGAAGAGGGT TTATGTAGGG GATGAGATTG ATAACTGTAA AGATCTTTCT GGTATCGTCT ATAGACGGCC GTTTGAAAAG GCGCGTACAC AGTTAACTGG TGGCCAAATG AGATTGAGGA ACTAACGCTA TTTGAAGGGA ATGTTAGTAA ACTGGGATGC TGAGAGAATA ATATGGGATC GATTATTTTC ACCCTCTGTG TTAAACGTAC CCTACATTAT TGGTTAAACA ATTGTCACGC TGATTGAAAA CAATTAGATT AACCCTACTG AAACTTCCTT ATTGGTCACT GAGCCCTATT TCAACCTCCC CAACATAGCA GAAACGTACG ACCAGATGAT CTTCGAGGAA TTTGAGTTTC AGAGCTATTT CAGATGTGCC CGTGAGTTGT AAGGCGTGTC TGCCTGGAGT AACGCTGATA CCCTCGTCAA GCTGCTGCTC TGATACCGTA TGGTGGATTA TATGAGTCTG ATCAAGGCAT TCCTCCTCAA TGTACAATTG TAATCGATAT GGGTTATTCA TATACACACG TCGTACCTAT ACGTGACGGT CAGATCGTCT GGGAACACGT TAAGCGGTAC GTTTCGCTCG TATACAAGCA GGCTCCAATA AAACTGACTA GCCGTTTTTA TTAGAATTGA TGTCGGGGGC AAGCTCTTAA CAAACCATCT CAAACATCTC ATATCCTTCA GACAGTGGAA CATGATTGAC CAGACTCATG TCGTCAATTC TGTAAGAGAA GCATGCGGTT ATGTGAGCTT GAATTGGAAA GGTGACCTTG AGACCTGCAA GTATGTCCAT CCTGCTTTTT TTCTACGTTG TTTGAGCTGA CAGATAACGT AGAGCGAAAC CGAGGAAGAA CCCAATTATT CAGGAATATG TCCTCCCTGA CTTTTCAGCC AACTCGACTT CACGTACGGG TTATATCCGA TCTGGGCCCA ATGCTGCTCC ACCAGAGGAG ACAAACGGCA CAGGAGAGGT GAACGGTAAA CAAAAGCCAG AGGAGGAGGA GCAGGTGCTT TGGATGGGGA ATGAACGATT CGCCGGCCCG GAACTCCTAT TCCATCCCTC AGACATTGGT ATGTGGTTAC AACCGAAATG TAATGCTATG AAACTGACCG TAAGATGCAG GACTAAAGCA AACTGGCTTG CCAGAAACAA TAGCATATGT AATCTCACAA ATGCCTGAAG AGTTAAGAGG CATGTTCTGG GCTCATATTG GAATAATTGG CGGTTTGGGT AACATCGAGA ATTTGGGAGA ACGATTGTGA GCGAAATAAA CGGACTGATA ACTTTCGAAT CTAATGAATG CGCAGAGAGC GAGATTTACA GGCTCTTTGC CCTGTCGAGT ACGAGATCGG TATCTATGAA GCATTTGAGT ATGTTTTTTT TTCTTTTTCG TCTCCTTCCT ACAATTGCCC CCTCTAACTT TTTTTCCATC AGTCCCGCAA GTCTGGCGTA CACTTCCGCT ACAGCTTTGA CTTCATCAGA AGTCTACATG TCAACTTATC CAGTAACTCG AACGGAGTAT TTTGAACAGG GCTCTTCCCT CTGCAGACGG AAATTCGGGT CGTTCGGTGC TCCGGCTTAC AACATTGATC CACCTGGTTT CTCCTCAGGA GTCGATGCCA GAACTGAAGT CAGCGATGAC GAGATGGAGA TGAGATATGC TATGGGTCTG GAAAGTAAGA AAGGCGGGAA GGGGAAGAGA AGAAAGGAAG AAGAAGAGGT GACAAGTGGG AACTGGGGCG GCAGGAGACG GAGAACGACG GGTCTCGGGG GGTTTTAGGC GTGTTTGACT GGAAGTCGTT GCCGGTGTTT TGTTCGTTGT AGCATATCAC CGTGCATACA GTAGCATTTC GGCTGCCTCA TACCTTTTGA TTAGACAGCC CTTGATTGTT TTGAGC
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Protein sequence | MATPPVLIID NGAYEIKAGI SGVDWEPRVL PNSIARSRTE KRVYVGDEID NCKDLSGIVY RRPFEKGMLV NWDAERIIWD RLFSPSVLNI NPTETSLLVT EPYFNLPNIA ETYDQMIFEE FEFQSYFRCA PAALIPYGGL YESDQGIPPQ CTIVIDMGYS YTHVVPIRDG QIVWEHVKRI DVGGKLLTNH LKHLISFRQW NMIDQTHVVN SVREACGYVS LNWKGDLETC KAKPRKNPII QEYVLPDFSA NSTSRTGYIR SGPNAAPPEE TNGTGEVNGK QKPEEEEQVL WMGNERFAGP ELLFHPSDIG LKQTGLPETI AYVISQMPEE LRGMFWAHIG IIGGLGNIEN LGERLERDLQ ALCPVEYEIG IYEAFDPASL AYTSATALTS SEVYMSTYPV TRTEYFEQGS SLCRRKFGSF GAPAYNIDPP GFSSGVDART EVSDDEMEMR YAMGLESKKG GKGKRRKEEE EVTSGNWGGR RRRTTGLGGF
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