Gene CNJ00880 details

Gene Information

• Locus tag: CNJ00880
• ID: 3254340
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006679
• Strand: +
• Start bp: 253473
• End bp: 255618
• Gene Length: 2146 bp
• Protein Length: 490 aa
• GC content: 46%
• IMG OID: 638253245
• Product: protein-vacuolar targeting-related protein, putative
• Protein accession: XP_567468
• Protein GI: 58260116
• COG category: [Z] Cytoskeleton
• COG ID: [COG5277] Actin and related proteins

Plasmid Coverage information

• Num covering plasmid clones: 35
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CTTTCAACTC ATAGTTTACA CGCATCTGAC AACCCAGTAC TGTGGCCCTG GCCTTCACAA 
TAATGGCCAC ACCTCCGGTC CTTATAATAG ACAATGGGGC TTACGAGATC AAAGCGGGTA 
TATCGGGAGT CGATTGGGAG CCAAGGTGCG TAAACTGTCT TTCAGGACTT TTGATGGCGA 
CTGAACTGAG CTGATTGTAT TGTAGAGTAT TGCCCAATTC CATAGCTAGA TCGAGGACTG 
AGAAGAGGGT TTATGTAGGG GATGAGATTG ATAACTGTAA AGATCTTTCT GGTATCGTCT 
ATAGACGGCC GTTTGAAAAG GCGCGTACAC AGTTAACTGG TGGCCAAATG AGATTGAGGA 
ACTAACGCTA TTTGAAGGGA ATGTTAGTAA ACTGGGATGC TGAGAGAATA ATATGGGATC 
GATTATTTTC ACCCTCTGTG TTAAACGTAC CCTACATTAT TGGTTAAACA ATTGTCACGC 
TGATTGAAAA CAATTAGATT AACCCTACTG AAACTTCCTT ATTGGTCACT GAGCCCTATT 
TCAACCTCCC CAACATAGCA GAAACGTACG ACCAGATGAT CTTCGAGGAA TTTGAGTTTC 
AGAGCTATTT CAGATGTGCC CGTGAGTTGT AAGGCGTGTC TGCCTGGAGT AACGCTGATA 
CCCTCGTCAA GCTGCTGCTC TGATACCGTA TGGTGGATTA TATGAGTCTG ATCAAGGCAT 
TCCTCCTCAA TGTACAATTG TAATCGATAT GGGTTATTCA TATACACACG TCGTACCTAT 
ACGTGACGGT CAGATCGTCT GGGAACACGT TAAGCGGTAC GTTTCGCTCG TATACAAGCA 
GGCTCCAATA AAACTGACTA GCCGTTTTTA TTAGAATTGA TGTCGGGGGC AAGCTCTTAA 
CAAACCATCT CAAACATCTC ATATCCTTCA GACAGTGGAA CATGATTGAC CAGACTCATG 
TCGTCAATTC TGTAAGAGAA GCATGCGGTT ATGTGAGCTT GAATTGGAAA GGTGACCTTG 
AGACCTGCAA GTATGTCCAT CCTGCTTTTT TTCTACGTTG TTTGAGCTGA CAGATAACGT 
AGAGCGAAAC CGAGGAAGAA CCCAATTATT CAGGAATATG TCCTCCCTGA CTTTTCAGCC 
AACTCGACTT CACGTACGGG TTATATCCGA TCTGGGCCCA ATGCTGCTCC ACCAGAGGAG 
ACAAACGGCA CAGGAGAGGT GAACGGTAAA CAAAAGCCAG AGGAGGAGGA GCAGGTGCTT 
TGGATGGGGA ATGAACGATT CGCCGGCCCG GAACTCCTAT TCCATCCCTC AGACATTGGT 
ATGTGGTTAC AACCGAAATG TAATGCTATG AAACTGACCG TAAGATGCAG GACTAAAGCA 
AACTGGCTTG CCAGAAACAA TAGCATATGT AATCTCACAA ATGCCTGAAG AGTTAAGAGG 
CATGTTCTGG GCTCATATTG GAATAATTGG CGGTTTGGGT AACATCGAGA ATTTGGGAGA 
ACGATTGTGA GCGAAATAAA CGGACTGATA ACTTTCGAAT CTAATGAATG CGCAGAGAGC 
GAGATTTACA GGCTCTTTGC CCTGTCGAGT ACGAGATCGG TATCTATGAA GCATTTGAGT 
ATGTTTTTTT TTCTTTTTCG TCTCCTTCCT ACAATTGCCC CCTCTAACTT TTTTTCCATC 
AGTCCCGCAA GTCTGGCGTA CACTTCCGCT ACAGCTTTGA CTTCATCAGA AGTCTACATG 
TCAACTTATC CAGTAACTCG AACGGAGTAT TTTGAACAGG GCTCTTCCCT CTGCAGACGG 
AAATTCGGGT CGTTCGGTGC TCCGGCTTAC AACATTGATC CACCTGGTTT CTCCTCAGGA 
GTCGATGCCA GAACTGAAGT CAGCGATGAC GAGATGGAGA TGAGATATGC TATGGGTCTG 
GAAAGTAAGA AAGGCGGGAA GGGGAAGAGA AGAAAGGAAG AAGAAGAGGT GACAAGTGGG 
AACTGGGGCG GCAGGAGACG GAGAACGACG GGTCTCGGGG GGTTTTAGGC GTGTTTGACT 
GGAAGTCGTT GCCGGTGTTT TGTTCGTTGT AGCATATCAC CGTGCATACA GTAGCATTTC 
GGCTGCCTCA TACCTTTTGA TTAGACAGCC CTTGATTGTT TTGAGC 

 

Protein sequence

MATPPVLIID NGAYEIKAGI SGVDWEPRVL PNSIARSRTE KRVYVGDEID NCKDLSGIVY 
RRPFEKGMLV NWDAERIIWD RLFSPSVLNI NPTETSLLVT EPYFNLPNIA ETYDQMIFEE 
FEFQSYFRCA PAALIPYGGL YESDQGIPPQ CTIVIDMGYS YTHVVPIRDG QIVWEHVKRI 
DVGGKLLTNH LKHLISFRQW NMIDQTHVVN SVREACGYVS LNWKGDLETC KAKPRKNPII 
QEYVLPDFSA NSTSRTGYIR SGPNAAPPEE TNGTGEVNGK QKPEEEEQVL WMGNERFAGP 
ELLFHPSDIG LKQTGLPETI AYVISQMPEE LRGMFWAHIG IIGGLGNIEN LGERLERDLQ 
ALCPVEYEIG IYEAFDPASL AYTSATALTS SEVYMSTYPV TRTEYFEQGS SLCRRKFGSF 
GAPAYNIDPP GFSSGVDART EVSDDEMEMR YAMGLESKKG GKGKRRKEEE EVTSGNWGGR 
RRRTTGLGGF