Gene CNJ00880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNJ00880 
Symbol 
ID3254340 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006679 
Strand
Start bp253473 
End bp255618 
Gene Length2146 bp 
Protein Length490 aa 
Translation table 
GC content46% 
IMG OID638253245 
Productprotein-vacuolar targeting-related protein, putative 
Protein accessionXP_567468 
Protein GI58260116 
COG category[Z] Cytoskeleton 
COG ID[COG5277] Actin and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTTTCAACTC ATAGTTTACA CGCATCTGAC AACCCAGTAC TGTGGCCCTG GCCTTCACAA 
TAATGGCCAC ACCTCCGGTC CTTATAATAG ACAATGGGGC TTACGAGATC AAAGCGGGTA
TATCGGGAGT CGATTGGGAG CCAAGGTGCG TAAACTGTCT TTCAGGACTT TTGATGGCGA
CTGAACTGAG CTGATTGTAT TGTAGAGTAT TGCCCAATTC CATAGCTAGA TCGAGGACTG
AGAAGAGGGT TTATGTAGGG GATGAGATTG ATAACTGTAA AGATCTTTCT GGTATCGTCT
ATAGACGGCC GTTTGAAAAG GCGCGTACAC AGTTAACTGG TGGCCAAATG AGATTGAGGA
ACTAACGCTA TTTGAAGGGA ATGTTAGTAA ACTGGGATGC TGAGAGAATA ATATGGGATC
GATTATTTTC ACCCTCTGTG TTAAACGTAC CCTACATTAT TGGTTAAACA ATTGTCACGC
TGATTGAAAA CAATTAGATT AACCCTACTG AAACTTCCTT ATTGGTCACT GAGCCCTATT
TCAACCTCCC CAACATAGCA GAAACGTACG ACCAGATGAT CTTCGAGGAA TTTGAGTTTC
AGAGCTATTT CAGATGTGCC CGTGAGTTGT AAGGCGTGTC TGCCTGGAGT AACGCTGATA
CCCTCGTCAA GCTGCTGCTC TGATACCGTA TGGTGGATTA TATGAGTCTG ATCAAGGCAT
TCCTCCTCAA TGTACAATTG TAATCGATAT GGGTTATTCA TATACACACG TCGTACCTAT
ACGTGACGGT CAGATCGTCT GGGAACACGT TAAGCGGTAC GTTTCGCTCG TATACAAGCA
GGCTCCAATA AAACTGACTA GCCGTTTTTA TTAGAATTGA TGTCGGGGGC AAGCTCTTAA
CAAACCATCT CAAACATCTC ATATCCTTCA GACAGTGGAA CATGATTGAC CAGACTCATG
TCGTCAATTC TGTAAGAGAA GCATGCGGTT ATGTGAGCTT GAATTGGAAA GGTGACCTTG
AGACCTGCAA GTATGTCCAT CCTGCTTTTT TTCTACGTTG TTTGAGCTGA CAGATAACGT
AGAGCGAAAC CGAGGAAGAA CCCAATTATT CAGGAATATG TCCTCCCTGA CTTTTCAGCC
AACTCGACTT CACGTACGGG TTATATCCGA TCTGGGCCCA ATGCTGCTCC ACCAGAGGAG
ACAAACGGCA CAGGAGAGGT GAACGGTAAA CAAAAGCCAG AGGAGGAGGA GCAGGTGCTT
TGGATGGGGA ATGAACGATT CGCCGGCCCG GAACTCCTAT TCCATCCCTC AGACATTGGT
ATGTGGTTAC AACCGAAATG TAATGCTATG AAACTGACCG TAAGATGCAG GACTAAAGCA
AACTGGCTTG CCAGAAACAA TAGCATATGT AATCTCACAA ATGCCTGAAG AGTTAAGAGG
CATGTTCTGG GCTCATATTG GAATAATTGG CGGTTTGGGT AACATCGAGA ATTTGGGAGA
ACGATTGTGA GCGAAATAAA CGGACTGATA ACTTTCGAAT CTAATGAATG CGCAGAGAGC
GAGATTTACA GGCTCTTTGC CCTGTCGAGT ACGAGATCGG TATCTATGAA GCATTTGAGT
ATGTTTTTTT TTCTTTTTCG TCTCCTTCCT ACAATTGCCC CCTCTAACTT TTTTTCCATC
AGTCCCGCAA GTCTGGCGTA CACTTCCGCT ACAGCTTTGA CTTCATCAGA AGTCTACATG
TCAACTTATC CAGTAACTCG AACGGAGTAT TTTGAACAGG GCTCTTCCCT CTGCAGACGG
AAATTCGGGT CGTTCGGTGC TCCGGCTTAC AACATTGATC CACCTGGTTT CTCCTCAGGA
GTCGATGCCA GAACTGAAGT CAGCGATGAC GAGATGGAGA TGAGATATGC TATGGGTCTG
GAAAGTAAGA AAGGCGGGAA GGGGAAGAGA AGAAAGGAAG AAGAAGAGGT GACAAGTGGG
AACTGGGGCG GCAGGAGACG GAGAACGACG GGTCTCGGGG GGTTTTAGGC GTGTTTGACT
GGAAGTCGTT GCCGGTGTTT TGTTCGTTGT AGCATATCAC CGTGCATACA GTAGCATTTC
GGCTGCCTCA TACCTTTTGA TTAGACAGCC CTTGATTGTT TTGAGC
 
Protein sequence
MATPPVLIID NGAYEIKAGI SGVDWEPRVL PNSIARSRTE KRVYVGDEID NCKDLSGIVY 
RRPFEKGMLV NWDAERIIWD RLFSPSVLNI NPTETSLLVT EPYFNLPNIA ETYDQMIFEE
FEFQSYFRCA PAALIPYGGL YESDQGIPPQ CTIVIDMGYS YTHVVPIRDG QIVWEHVKRI
DVGGKLLTNH LKHLISFRQW NMIDQTHVVN SVREACGYVS LNWKGDLETC KAKPRKNPII
QEYVLPDFSA NSTSRTGYIR SGPNAAPPEE TNGTGEVNGK QKPEEEEQVL WMGNERFAGP
ELLFHPSDIG LKQTGLPETI AYVISQMPEE LRGMFWAHIG IIGGLGNIEN LGERLERDLQ
ALCPVEYEIG IYEAFDPASL AYTSATALTS SEVYMSTYPV TRTEYFEQGS SLCRRKFGSF
GAPAYNIDPP GFSSGVDART EVSDDEMEMR YAMGLESKKG GKGKRRKEEE EVTSGNWGGR
RRRTTGLGGF