| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNI04000 |
|---|
| Symbol | |
|---|
| ID | 3259430 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006694 |
|---|
| Strand | - |
|---|
| Start bp | 1068950 |
|---|
| End bp | 1071468 |
|---|
| Gene Length | 2519 bp |
|---|
| Protein Length | 657 aa |
|---|
| Translation table | |
|---|
| GC content | 49% |
|---|
| IMG OID | 638258895 |
|---|
| Product | conserved hypothetical protein |
|---|
| Protein accession | XP_572955 |
|---|
| Protein GI | 58271598 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0012462 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCATC AGATCACCTA TGACTACGTT GAACATGTTG ACCCAAACCT CACCTGCGCA
ATCTGCCAAT CCGCCCTTGT AGATCCTGTC ACGACGACGT CCTGCAAGCA CACCTTTTGC
AGAGACTGCA TCACCCGAGC CATCGTTCAC AACCCACAAT GTCCCATAGA CAGGTCAGCA
CTGACAATGA GCAGTTTAAG GGACACTGAA CAACTGGTGA AGCTGGTGAG TGAACGGACT
TCATAGCAAT GCGGCGTCCG ACGGTCGGTG CTGACATGTG AGCTTTACCG TTAGATGCTC
GATGAGCTGA AAGTAAAATG TGGGGCTGAG GGATGTGGCA CGGTTCTGCA AAGGGGGTTG
TTGCTGGCAC ATCTTAAGAC ATGTTCTAAA GCGATCGTCA CTTGCCAAGA TGGAGATTGC
GGCTTGTCGG TGAGTCAAGT GTCATTGATG CATGTGTCAT TCTCATCAGA ATCCGAAAGC
TAACGTACCA TCTCAGATGA CCCGTCAAAG ACTGCCTCAT CACAGGGCGT ACGAATGTTT
TCAAAGAAAG ATGGAGTGCA GGAAATGTGG CACAATACTG GTATTCAAAG ATCAAACGGT
AAGCATGCAT CGACAGTTTT AACCCCATCA CTGCTGAGCT GTGAAGACCC ATACCAATAT
AGAATGCCGC GATGAGACAG GTGTCTGTGG TCTATGTGGT CAAAACAGTA AGCACGCTGT
TGAGCTGTGA ATTGGGAAAC GCTGAACACT GACCTGTAGT GGGTCCTGAT GCTCACATGC
ACAAATGGCA ATGCCCCCTG GTCCGCATCC CTTGTCCTCA CTCTGCTAGA GGATGCTCAT
CGATTATCCC CCGCTCGGAT CTTCAAGCTC ATATATCTAT TTGCCCGTTT GAAGCATTCT
CGGGTTTCTT CGAGATGAAT GATGCGAGGT TGAAGTCATT AACATCTCGA GTCGAAAGTC
TGGAAGAGGA GCTAGAGCGT ATGAGGGAGC ATTTGAAGCG AATAGAAGGT AATGTCGAGA
CGATGGGCAA TATGAGGAGG GAAACGGGTG ATGAATGGAG ATGGAGAGAA GTGGGCCGGA
TGCGGCTTGG TGATACCCCA CCTCCTGTCG CATCTAGCCA TAGCGACCCC CAAACCACAT
CAACCATCTT GTCATCCCCA CTAACTCCCA CTTCTTCTCA CCCTTCCCCT CAACCTGTCA
TCTCGTCTAT TTTTCCTGGT ATTAGCATCC TGTCATCCGG AGGAGCAAGA CCTGACTTGG
CCCCCCATCA TCACCGTTCT CTTGTTGCAC CATCCTTTGG CTCTCACCAA TCATATGCTG
ATTGGGCATT CAGCCGGCTA TCGGGGAACG CAGGCAATGT AGGATGGGAG GAAGTGATCA
ATGGTTTGCG TGCGGTGGTG ATCCAGCTGG CTTCCGGTTT AGATAGTATG GAGCGCCGGA
ATGAAGTGTG CGCTTAATTT CTTTTTTCCA CTCAACATGA AGCACGACCT GATGAAGAAA
ATCCATAGGA GGACAATGAC GGAAAGTTTG AGAGTGTTGG AAGAAGTAGG TAGTTTGAGA
GCTATTGTTA CCACCATGCG CATGCGTATG TCCAGCTTTC TTTTCGCATA TTTACTTCTC
ACTAATTTAT CACACTAAAA AGAAGTTATG ATGGAGCGAC CCTTCCGACC TCCATCTTTC
CAGTTCCAAG GCGACAGCCT GTTTTCACGT ACCGCTGAGT CCACTCTCAC CCCAACTTTG
AACCAGCAAG CAACTGTGGC ATTTTCTTCT ACCACCGATC AATCAACATC AGAGCAACGT
TCTCAATCAA GTGATGAAAA TCTGAGCGTG AGTGTCAGCG GTGACCAGGA AGACTCCGGC
AGAGAGACAG CTTCAATCAC CGAATCCGTG GTATTCTCGG CCCAAGGTCA TCCCGCTTCT
TCCTCCCGAC CTTCCTCTTC TACAAATTCC CTTATCACGG CCGGTGCTGG TTTGTCCGGG
AATAAGAGGA CTCCAATGTC TAGAGCCCGA CCGAACTTGG GTGGGTATCA GGGAGTGACG
GTGGAAGTGA GGTATGATGA GAACGCTGAT GGGATCGAGG GAGGCGCAAG TTATAGTAGG
ACAAGCAACG CCGCAAGCGG GAACAGAAAT ACGATTGGGA CGAGTGGGGC GGAAATGACG
GGTAGACCCA TGGCCTTCCC ACCTGCGTCA CAAGACGATG ATGATGTCTC TGCAACAACT
AACAGAAATG CAGGAGGGGA TGTGAACGAG GCTACTGAAA GAAGCATGGG AACCCGGGAA
CGAAAGGTTA ATCTCGCGAA TCCTATTGCA AGGTTGATGA GGAGAGGGCC ACAAGGAAAT
GGAAGCCCTA GGCTGTAAAG ATTGCCGCCA GTTGGATGAT ACTCGAGGTA GAAAGAGACG
ATTGAAATAC ATTCCCAAAC ATATTACCCA TTTGTAATTA TTCACCATTT TGTGCAGCAT
TTAATTATAC TCCGGCATTC TCAATTAATA ATTAATGTTG ATACGCCTTT TATTTATAT
|
|---|
| Protein sequence | MAHQITYDYV EHVDPNLTCA ICQSALVDPV TTTSCKHTFC RDCITRAIVH NPQCPIDRSA
LTMSSLRDTE QLVKLMLDEL KVKCGAEGCG TVLQRGLLLA HLKTCSKAIV TCQDGDCGLS
MTRQRLPHHR AYECFQRKME CRKCGTILVF KDQTTHTNIE CRDETGVCGL CGQNMGPDAH
MHKWQCPLVR IPCPHSARGC SSIIPRSDLQ AHISICPFEA FSGFFEMNDA RLKSLTSRVE
SLEEELERMR EHLKRIEGNV ETMGNMRRET GDEWRWREVG RMRLGDTPPP VASSHSDPQT
TSTILSSPLT PTSSHPSPQP VISSIFPGIS ILSSGGARPD LAPHHHRSLV APSFGSHQSY
ADWAFSRLSG NAGNVGWEEV INGLRAHDLM KKIHRRTMTE SLRVLEEVGS LRAIVTTMRM
LMMERPFRPP SFQFQGDSLF SRTAESTLTP TLNQQATVAF SSTTDQSTSE QRSQSSDENL
SVSVSGDQED SGRETASITE SVVFSAQGHP ASSSRPSSST NSLITAGAGL SGNKRTPMSR
ARPNLGGYQG VTVEVRYDEN ADGIEGGASY SRTSNAASGN RNTIGTSGAE MTGRPMAFPP
ASQDDDDVSA TTNRNAGGDV NEATERSMGT RERKVNLANP IARLMRRGPQ GNGSPRL
|
|---|
| |