Gene CNI03990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNI03990 
Symbol 
ID3259431 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006694 
Strand
Start bp1067494 
End bp1068857 
Gene Length1364 bp 
Protein Length329 aa 
Translation table 
GC content47% 
IMG OID638258894 
Producthypothetical protein 
Protein accessionXP_572616 
Protein GI58270920 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.00555332 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACTACG TCTCAGTCCT ACCCCAAGGT GCGCCCACTT CTCTACACCC GCAAGCTCAA 
CACAACTGAC GCGACACGAG CAGACATTGA CCTTTCAAGC TCACATCAGT ATCTCCGTAT
TCCACATCCA CGTACTGGTA TGTCTCATTG TTCGCCCAAT ATACACATGC CCACTCCTTA
TGCTATTTGT AGGAGAGGCA CAACTCTATC TTCCGTACAC AACTGCTGCT GGCCAAGATG
TCGTCCTCGA AGCTGCCAAA CTCAATGGAT CACAACGGAG GACATGGTTC ATTGGCGACT
CCGGAATAGA TGGTGCGTCT GCATTTTGGT CAATGGTAAA GCTGATCAAC CACAGCCGGT
GCTATGCTTG TACATTACCC CATTGACCCA TTATTCATTG TTATACCTCT TATCCTAGCG
CTTGTTCCTG TGAGTTTCGT CGCTTGAACT TACCTCTAGT ACGGACTAAC AATTCGGGAC
ATCAGAATGG GCCCCCTCCT CCATTCCAGC CGCTTCATGA TCTTCTTTCA GCCGCATCAA
CGTCGACATC TTTCGCCCTT CCCCTACCTT TTACTTCTGG TACAAAAGGC AAATCGCCTA
ATAGGTCGGA AGGCGTGAAC GAGGACATCG AGAGACTGTT AACACTGAAA AATGTGAAAA
GAGCGTTCAA GGCTTGCTGC GAAAAAAAAG GTTCGTCCCT TTGTTGATGT TTCTGAAGTG
CTTCTAACAG TATATATATG CCAGTCATCT CTACTGCCCC TCCATCCCCG GATCCTTCCT
CTTCTCCGCA ACCTCCCACC CAGAGCTTCT ACAGGCCTTC ACAAGATTTG ATCATCCAAC
ATCTCAAACG CAAGGCAGGA TTTTTTGCCG GACCAGAAGA GTTTGAAAAA TTTGATCACC
TTGTGCGAGG CCTGGGCAGA GATGGGCTTT TGGAAAAAGA TATCGATGAG GAACTGTTGA
GTTGTAAGTC CTGAGGGATT TTGTCTAACA CGTCCAATTT ACTAATGTGC AATCAGCGGC
GAGGTTGAGA GCTGCATGTG ATCACTTGGC CCAATGGTTA CCTGGCCCAG TCTTGTCAAA
ACTCGTAAAG TCATACGAGT ATGTTTTCCT TCCCTTTTTT TCATTAAATA TTTGCTGATA
CATAAAAAAT TTCAAGCTTT GCTGCGCTCG AAGAACACCT CGCCTCTCGT TCAGCCGCAG
CATTCGCAGC CTCTCAAATC ACAACTTCCA ACAACAAGAA AGAGGCCAAA GGCATTAAGC
GTAAAGCGCC GCCGGCAAGT AGGGGTGTTG AGTCGTTGAA AAAGGTTAAC ACCAACAAGA
TGGCAAAATT GACGTCTTTC TTCAAACCGA AGGAGAAGAA ATAA
 
Protein sequence
MDYVSVLPQD IDLSSSHQYL RIPHPRTGEA QLYLPYTTAA GQDVVLEAAK LNGSQRRTWF 
IGDSGIDAGA MLVHYPIDPL FIVIPLILAL VPNGPPPPFQ PLHDLLSAAS TSTSFALPLP
FTSGTKGKSP NRSEGVNEDI ERLLTLKNVK RAFKACCEKK VISTAPPSPD PSSSPQPPTQ
SFYRPSQDLI IQHLKRKAGF FAGPEEFEKF DHLVRGLGRD GLLEKDIDEE LLSSARLRAA
CDHLAQWLPG PVLSKLVKSY DFAALEEHLA SRSAAAFAAS QITTSNNKKE AKGIKRKAPP
ASRGVESLKK VNTNKMAKLT SFFKPKEKK