Gene CNI03980 details

Gene Information

• Locus tag: CNI03980
• ID: 3259677
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006694
• Strand: -
• Start bp: 1065235
• End bp: 1067114
• Gene Length: 1880 bp
• Protein Length: 543 aa
• GC content: 51%
• IMG OID: 638258893
• Product: translation initiation factor, putative
• Protein accession: XP_572932
• Protein GI: 58271552
• COG category: [J] Translation, ribosomal structure and biogenesis; [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon)

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.00811612
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GCCATGTTTG ACCCCCGTGC AGGAGCTCCA AAACGATGGG CAAGCCAGTC CCAGGACTTT 
CAGGCAGTAA TTCTTGTTGG TTACGGCGAA AAGTGGGCTA TTTTCATCCT TGACACCTGG 
TATTCAAGAC GCTGATCGCA AGATAGCTTG TACCCATTCA ACCAGGGTAC CAACGTAATT 
TCCAAAGCTC TTTTGCCCGT CGGTAACGTT CCCATTATCA ACTGTGTGAT AGATTGGGTA 
CTTGCCGCTG GTCTCTTGGG TATGGTCTTC CTTGCGATCA TGTTAGTATC TCTGAGCTGA 
CGTATATCCG CCTTCTGTCC TTTGCAGATA TCCTCATCAT AGTCCCTAAC GCCTTCCATG 
ATCAGATCGC CGACCACATT GCAGAGGCGT ATAACAAATC TACTCATTCT CGTGTGCGAA 
TAAATCTCAG GAAAAATTCT GAGGGTGAAA GGGATGAAGA TGAAGGTGAC AGTGAAGAAA 
AGGACGGGAC GGCTAGGATT CTGAAGAAGT TCAGGAGTTT CATCAAGGTA TGCTGCAAGC 
CGGAAATTTT GGGTAATTAT ATCGCTTATA CTGCTTATAG AGTGATTTTG TGCTTCTTCC 
TTGTGACATT TCACCCCCAT CATACCTCCC TCTTAAGACA ATCTTGGACA AGCACCGCTC 
ATCACCAAAG GCTGTAATGA CTTCTGTCTT TTACGAACCC ATAGAGTCCG TCAAGGATGC 
GGAGGAAAAG ATATTGGTTG GACTCGACAA GACTTCCGAC GAACTCCTTC TCATCACTCC 
CTTAGAAGGT ATGGAGGAAG ACCTCGAGCT CCGCATGTCT CTCCTTAACC GCCATCCCAC 
TCTTTCACTT ACTACCAGAA TCCTCGATGC GCACGTCTAC GTTTTTCGCC GGACGTTCTT 
GGACTTGTTG GCGACCAGGA GAGCAAAGGA TTTGAGTAGC ATGAAGGAGC AGGTTGTGCC 
TTGGTTGGTC AAGGGTGGGT GGCAGCGAGG TTTGGGTGAA AGATGGGAAC CTATCCTGGA 
CCCGCCTAGC CGAGATCCTC TCGCCGAAGC TCTTGCTCGT TCAACTACTG CTCCTCCTTC 
CCGCTCTCTT CTCCACCCAT CATCCTCTCC TTCATCTGAC CGTACTCCCT TACCCCAAAC 
ATCCCCGGCC TCCCCTTCCG GCGATGCCGA TACGATGTAC AGCTCTGGTA TCCTCCCCAC 
CGCTCCTTCC CGTACCCGCA AGGGCTTCAA GCCCGAGTGG AAATGTCAAG TCTTGGTTAT 
CACTCCTCCA CCCGCTCCTC CTGCGCCTGC GCCCGTACAA GGGAAAGGTG GGAAGCAAGA 
TAAATCACGC GCACCTGTGT ACGAACCCGA GCACCTCATC CGTGCCAACT CGCTCGCCGG 
TTACTGGGAG CTTAACCGTA GATTTATCAA GTCTCTTTCC TCTACCACCC CGGCTGCTAA 
GAGTGCTCAG CCTGTGCGAA ATATCATACC TGAAGATGCG GGGACAGCGC CCGCAATCAG 
CCCCGCGGCG CAGATTTCGC CGGATAGTGT GCTCGGGGAG GGTACACGGG TTGGAGAAAA 
GACAAGTATC AAGAAGTGTA TCATTGGAAG GCATTGTGTG ATTGGCAAAG GGGCCAAGTT 
GAATAACTGT GTGATCTGGG ATTTCGTCAC TGTTGAAGAA AAGTAAGTCG CATCAGATCA 
GAGTTGCAAG ATTGTCAGTT GACCGACGTA ATTCAGTGCG AGGATTGAAA ACTCCATCAT 
CTGTTCCAAT GGTCGTATCG GTGAGAAGGC GCAAGTCAAG GACTGCGAGT TTGGAACTGG 
CTTCGAGGCC AAGCCTGGCG CTATCCTCAA GGGGGAGAGA CTCATTGCCG GGCAAGAAGC 
ATAGAGTGGT AGTTAATGGA 

 

Protein sequence

MFDPRAGAPK RWASQSQDFQ AVILVGYGEN LYPFNQGTNV ISKALLPVGN VPIINCVIDW 
VLAAGLLDIL IIVPNAFHDQ IADHIAEAYN KSTHSRVRIN LRKNSEGERD EDEGDSEEKD 
GTARILKKFR SFIKSDFVLL PCDISPPSYL PLKTILDKHR SSPKAVMTSV FYEPIESVKD 
AEEKILVGLD KTSDELLLIT PLEGMEEDLE LRMSLLNRHP TLSLTTRILD AHVYVFRRTF 
LDLLATRRAK DLSSMKEQVV PWLVKGGWQR GLGERWEPIL DPPSRDPLAE ALARSTTAPP 
SRSLLHPSSS PSSDRTPLPQ TSPASPSGDA DTMYSSGILP TAPSRTRKGF KPEWKCQVLV 
ITPPPAPPAP APVQGKGGKQ DKSRAPVYEP EHLIRANSLA GYWELNRRFI KSLSSTTPAA 
KSAQPVRNII PEDAGTAPAI SPAAQISPDS VLGEGTRVGE KTSIKKCIIG RHCVIGKGAK 
LNNCVIWDFV TVEENARIEN SIICSNGRIG EKAQVKDCEF GTGFEAKPGA ILKGERLIAG 
QEA