| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNI03320 |
|---|
| Symbol | |
|---|
| ID | 3259673 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006694 |
|---|
| Strand | + |
|---|
| Start bp | 901603 |
|---|
| End bp | 902907 |
|---|
| Gene Length | 1305 bp |
|---|
| Protein Length | 339 aa |
|---|
| Translation table | |
|---|
| GC content | 52% |
|---|
| IMG OID | 638258824 |
|---|
| Product | vesicle budding-related protein, putative |
|---|
| Protein accession | XP_572627 |
|---|
| Protein GI | 58270942 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2319] FOG: WD40 repeat |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.443971 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGCTTAT GGCCCCTCAT ACAGTCCGCT CAAGCATCAA AACCCGTTCC TGTGGAGACT
CAGCATGAGG ACATGATCGT TAGTCTAGCC TGTGCCATGC CTTATATCCT GTTTCTGACC
AATTACTCTC ATCAGCACGA TGCACAGCTT GACTATTATG GAAAGCGACT TGCCACATGC
TCCTCTGACA GGACTATCCG AATTTTTAAC GTTATCAAGG GAGAAGCAAA GGGTGAACCT
GTGATCCTTA AAGGGTATAT TGTGTTGATT TCCCTCTGGC TTGGTATGCT GATGAATTAT
CGCCATAGGC ACACCGCCGC CGTCTGGCAA GTCTCATGGG CCCACCCTTC CTTCGGGTCA
ATACTTGCAT CTTGTTCTTA CGACGGGAGG GTTTTCATCT GGAAGGAAGT TGGACAGGGG
CAAGGCAAGG GAAGCGGTGG AGAGCTGCAA GACGGCTGGG AGAGAATCAA GGAACACACA
TTGCATACCG CGAGCGGTAA GTCCAAACTG ACGGAGGATA GGCTAATTCT GTAGTAAACT
CGATCGCTTG GGCTCCTTAT GACTTGGGAC CAATTCTTGC TTGTGCTTCT AGCGATGGCA
AGGTCTCCGT TCTCAGCTTC CAAAGTATAT CAGTTCCCGC AGCAGTTGAG TCTTATCGCT
AATTACCCTC AAAGACGATG GATCTATAGA GGTCAACATC TTCCCTGCCC ACGGCACCGG
TGCCAACGCC ATCTCCTGGG CTCCCAGCGT CCTCTCTACC GTTTCAGGCG TAAGCCGCTC
CCAACAGCCA TCCAACTCTC TCGCTCCTCA AAAGCGATTT GTTACCGCCG GCTCTGACAA
CCTCATCCGA ATCTGGGGAT TTGATGAAGA GCAGAAAAAA TGGACCGAAG AGGAGACCAT
CAAGGGTCAC GAAGACTGGG TCAGGGATGT CGCTTGGGCG CCGAACATTG GTTTGCCGGG
GATGTACATC GCGTCTGCTT CTCAGGTAAT TAATTATTCT GAATGTGGAG AATATTTGGT
CACTCACGCA ACTTTACTCA GGACCGAACC GTGCTTATCC ACTCCCGCCC ATCCCCCTCC
TCTTCCTGGA CATCCGCTCC TCTCCTCCCC AGCCTTCCCC AATCTCAGGA CCCTCATTTC
CCCGATGCCG TCTGGCGTGT TAGCTGGTCA CTCGCCGGAA ACGTTCTCGC CGTCAGCTGC
GGTGATGGTA AGGTCAGCTT GTGGAAGGAA GGTGTTGGAA AGGGATGGGA GTGCGTCAGT
GATTTCTCGA GCTAGATTGA TCAATACGAT GTAGCTTTAA ACGAT
|
|---|
| Protein sequence | MCLWPLIQSA QASKPVPVET QHEDMIHDAQ LDYYGKRLAT CSSDRTIRIF NVIKGEAKGE
PVILKGHTAA VWQVSWAHPS FGSILASCSY DGRVFIWKEV GQGQGKGSGG ELQDGWERIK
EHTLHTASVN SIAWAPYDLG PILACASSDG KVSVLSFQND GSIEVNIFPA HGTGANAISW
APSVLSTVSG VSRSQQPSNS LAPQKRFVTA GSDNLIRIWG FDEEQKKWTE EETIKGHEDW
VRDVAWAPNI GLPGMYIASA SQDRTVLIHS RPSPSSSWTS APLLPSLPQS QDPHFPDAVW
RVSWSLAGNV LAVSCGDGKV SLWKEGVGKG WECVSDFSS
|
|---|
| |