| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNI02060 |
|---|
| Symbol | |
|---|
| ID | 3259548 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006694 |
|---|
| Strand | - |
|---|
| Start bp | 567866 |
|---|
| End bp | 569487 |
|---|
| Gene Length | 1622 bp |
|---|
| Protein Length | 438 aa |
|---|
| Translation table | |
|---|
| GC content | 50% |
|---|
| IMG OID | 638258692 |
|---|
| Product | mandelate racemase/muconate lactonizing enzyme, putative |
|---|
| Protein accession | XP_572835 |
|---|
| Protein GI | 58271358 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
|---|
| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGCCA ACCCCCCTCA GCCAGTGAAT GTCACCACCG ATTCATCCGT GAAAGCCGAC
CGGGAGGCAG TCTACCTTCC TCCTTCCGAC CTGGCCTTGA AATATAACAA GGGCCTCCAG
TGCTCACTCG CAGTACAGCC TCATCCTAGT GCTGGCCAAG CTGGCTCCAC TAAGATCAAG
AAGATCGAAA CCTTCTACGT GCGTCCGAGG TGGCTCTTTG TCCGAATTGA AACGGAAGGA
GGTGTCGTTG GATGGGGTGA AGGAACTCTG GAAGGTCACA CTGAAGCCGT ACAAGGTAGT
ATGAAAGACA TTGCCAGAAG GTGAGCCTAT TGTTGTTCTT CACAAACATA CGTGCTTACC
ATGTGCAGAT TAATCGGCTG GGATGCTATG AACATTGAGG AAATTTACAC CTACCTTTAC
CGACATCGAT TCTACCGAGG TGGCGAAGTC CTTATGTCTG CCATGAGTGG TGTGGATATC
GCTCTTTGGG ATATCAAGGG CAAGGTCCTC GGCGTCCCCG TCTGGGAACT GCTCGGCGGC
AAGGTTCGAG AGAGATGTGA TGTTTACGGC TGGGTGTAAG TCCTTCAAAA TCTTGACAAT
GATTGGGCTA ATAAGTCACT CGCAGTGGTG GTGACCGACC CTCTGATGTT GCAGAACAGG
CCAAGGCCAG GAAAGAACAG GGGTTCCGCT TTGTCAAGAT GAATGGTGAG TTCTCATGCA
AACATATCCG ATTACGGATG CTGATAACCA TACAGCAACC GAATCAATTG GCTGGCTCGA
TTCCCCCCAT GCTCTCGATG ATACTGTAAA GAGACTGGCA GAAGTGAAGG CAGTTGGTAT
TGACGCTGGA CTGTAAGTGT GTCTGTCTAT CTTCGTGAGT AATGGGAACT GATTGGATGT
AGTGATTTCC ATGGTCGAGT CCATAAAGGC ATGGCAAAGC AGCTTGCTGC TGGCCTCGAG
CCCCACAGAC CTTTCTTCAT TGAAGAGCCT CTTTTGCCAG GGCATGTCAA CGAGCTTAAA
GACTTGTACA ACAAGACTAA CATTCCCATT GCTGTAAGCA GCCTGGCACG CGTACGTCAT
CGTAATTGGA CTAACTCTTG TCGTTTAGCT CGGAGAGCGA CTTTTTACTC GTCTTGATGT
CCGACCATAC CTTGAATCTG GCTGTATCGA CCTCATCCAG CCCGACATTG CTCATGCTGG
TGGTATTTCT GAAACAAAAA AGATTGCTAT CATGGCCGAG TGAGTTGTGC CCGTCTTTCC
TGGTTGAGAC GGAAAATTGA ATGTGTATTA GAGCATACGA TGTTGGTCTT GCTCCTCATT
GTCCTCTCGG TCCCTTGGCC TTCGCCGCCT CTCTTCATGT CGGTTTCTCA ACGCCTAACT
TCGTCATTTG CGAAATGAGC TTGAAGATGC ACTACAACGT GGGCAAGGAC CTCTTGTCCT
ACATGCTCAA CCCTGAAGTC TTCGACATCG AGAATGGTTC TATCGGGCTG CTTACTGCTC
CTGGTTTGGG CATTGAACTC AACGAAGATA TGATTAGGAA GGAGGCAGCT GAAGCGGCTG
AGCTCGAACC GTGGATTAAT CCTCTTTTCC GAGGAGAAGA TGGTGCGATG CGAGAGTGGT
AA
|
|---|
| Protein sequence | MSANPPQPVN VTTDSSVKAD REAVYLPPSD LALKYNKGLQ CSLAVQPHPS AGQAGSTKIK
KIETFYVRPR WLFVRIETEG GVVGWGEGTL EGHTEAVQGS MKDIARRLIG WDAMNIEEIY
TYLYRHRFYR GGEVLMSAMS GVDIALWDIK GKVLGVPVWE LLGGKVRERC DVYGWVGGDR
PSDVAEQAKA RKEQGFRFVK MNATESIGWL DSPHALDDTV KRLAEVKAVG IDAGLDFHGR
VHKGMAKQLA AGLEPHRPFF IEEPLLPGHV NELKDLYNKT NIPIALGERL FTRLDVRPYL
ESGCIDLIQP DIAHAGGISE TKKIAIMAEA YDVGLAPHCP LGPLAFAASL HVGFSTPNFV
ICEMSLKMHY NVGKDLLSYM LNPEVFDIEN GSIGLLTAPG LGIELNEDMI RKEAAEAAEL
EPWINPLFRG EDGAMREW
|
|---|
| |