Gene CNI01560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNI01560 
Symbol 
ID3259648 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006694 
Strand
Start bp451427 
End bp452540 
Gene Length1114 bp 
Protein Length138 aa 
Translation table 
GC content44% 
IMG OID638258639 
Productsterol-binding protein 
Protein accessionXP_572814 
Protein GI58271316 
COG category[I] Lipid transport and metabolism 
COG ID[COG3255] Putative sterol carrier protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATATTGCAGC CATCGACCGT ACAGCATACA ACTCCTGGGA ACTGTATAAC TACCCTTACG 
TAGGATTCCA ACAGCTTATA CCACTCTAAG CATCATGTCG GACCTCACTG AACCTGGTTT
CAAGGTACGT ATGTCTCCCG TTTACGACGG TTCTGCGTTC CCAAAGCGCT CACGATGGAC
TACTATGTAG ACCAGCGACG TTCTTCTGGT GCGTCTCTTA TCAAATGATA GGTACCCGTT
TATCTGACAG GAAACGTATA GTCCCTGGCT TCTGTTTTTG AGAAGATGCC TGATGACGAA
AAGAAGAGTC AAATTAAGAA GGTGAGTGGG CAGAGCTTTT CAAATGGTAA ACGATATGCT
TAGGCGACCC AACGCAGACA AATGGAGTCT TTCAGCTCAA TGTGAAGAAC AGCCAAGGGA
AAGAAGCTGT CTGGGCGTAA GTTCGAAGCT TGCTCAACGG TAGGAAATAT ACTAACACTT
CCCAGCATTG ACTTGAAGAA CGAAGGCAAG GTTACGAAAG GTCCGGCCAA ACGACCCGGT
GGGTTTTTGA GAGGTATATA TTGTACAGCA GTCAACTAAT GACCGATTAT TGCAGATGTC
TCAATTGCTC TAAGTGATGG TAGGTATTGA GCTGGCCATT CAAGTAAGAG AATCGCTCAA
TCTTGATCTC TCAATCAGAC ACCTTCATTG GCCTAGCAGA TGGTAAAGTG AATGCACAAA
AAGCCTTCAT GACTGGCGGT TTGAAGGTTA AGGGTAACGT GAGTCTTGAG ATCTGGGGAA
CCTCAGGATA TAGGGCTCAT CATGTCTATA ACTGCACAGA TTATGCTTGC CGTATGTCTT
ACCTTTTTCG CTATGTTTTT CGCTATGTTT CGAGATTGGC AGCTGACCAT TCCTTGTGTA
AATAATACGT AGACTAAGCT CGATGGCGTG CTAAAGGTAT GTCATCTGGC TGTTGTTTTG
TAACATTTTT TGTACTGACC AGTAAAATCA GAATGCCAAA GCGAAGCTGT AAATAGTAGA
TTTGTCTGGT GGGTTAGTAT TTGTACATGA GTGCATAACA AAAGCTGTAG CCAGATGTGA
GGCTTTTGCA ATTGTGCTTG AGGCAGTACC TCTC
 
Protein sequence
MSDLTEPGFK TSDVLLSLAS VFEKMPDDEK KSQIKKTNGV FQLNVKNSQG KEAVWAIDLK 
NEGKVTKGPA KRPDVSIALS DDTFIGLADG KVNAQKAFMT GGLKVKGNIM LAVCLTFFAM
FFAMFRDWQL TIPCVNNT