Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNI01400 |
Symbol | |
ID | 3259492 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006694 |
Strand | + |
Start bp | 414959 |
End bp | 416862 |
Gene Length | 1904 bp |
Protein Length | 519 aa |
Translation table | |
GC content | 54% |
IMG OID | 638258623 |
Product | choline kinase, putative |
Protein accession | XP_572982 |
Protein GI | 58271652 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0510] Predicted choline kinase involved in LPS biosynthesis |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.918034 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CGCGCCCTCA CACGCCCCGC CCTGCGCCGC CTGCACACGC CACCCAGCAT GGTGGTCACC CCCACCCGTC CCCCCGTCGA GCCATCCGGC CCCCCCCTCT CCCCCTTGGC ACTCGCCTCC ACTGCCCCCC GAAACAGCTC GGACTCATAC TTCGCCGCCC AAGCCGGATC AAGGCCGCTG CCCAGGCACA GGAGGACATC AGGAAGCAGC TTCTCAAAGC TGTCCGAGTT CAGCTTGGAC CCTCCGCTTC TCGACAAAAC GGATCAGTAC GCTGCCTCGC CTGACCAGAT CGATGAAAAC GGCGTCACAG GCGTCCGGCA TGTGGCGCTG AGTGTGGATG CCAGGTGAGT CTGTTGTATG GATCGTGTCT TCATGCGCCA GCTCAGTACC AAACCCCAGC GAATGGCGGC AGCCAGTTTT CAAGCAAAAA GTCCTAGCCA TCTTACGACG CCTTGTGAGT TCCTTGGAAA ACTATACCGT CTAACACATG CGCAGCACGT CCCGAGATGG TCCTCTACAC TCTTGACACC CACCAACATC CATCTTCAAA AAGTCTCGGG GGCCTTGACA AACGCCGTCT TCTTTGTCTC TTTCAATCCC GCTCCCAACC CAACTTCGCC TTCCGAATCG CCCCTGCTAA CCCCTACCAT TCCTCCATCT GATCCATCCC ACCCCCCACC GCTCACTCCC GACCAGTACC CCCACACCCT TCTCTTCAGA GTCTATGGCC CTTCCTCTGA GGCACTCATC TCCCGATCGG AAGAACTACG TATACTCCAC GTCCTTAGTA CTCAATATGG CATTGGCCCC AGAGTTTTTG GCACTTTTAC CAATGGCCGG GTCGAGGAAT TCTTCCCATC ACGCGCTTTG ACCGCTCAAG AGTTACGCGA CCCCAGTATT TCTCGTGGCA TTGCCCGGCG GATGCGCGAA CTTCACTCGG TGGACTTGCG TCGCTTGGGA TACGAACAAG GTCGCGCTAC GGAGCCCGCT TTATGGATAT GTCTCAAAGA ATGGTCTGAA GCAGCGGAAG ATGTCATCAC CTCTTTGACG GCCCTCGGCG GAACATTGGA AGCATGGGTA GAGCGTTTCT CTTTACATCG TATCCGGGAA GAAGTCACAA TCTACCGGAA CTTTGTAGAA TCGCAAAGTG GAAAGGGCAG TGGCGTTGTG TTTGCTCGTG AGTTTTTTTA TCCGTCCGTT TCAAATGAGG CTTATCGCTA CGCAGACAAC GACACGCAGT ATGGAAATCT GTTACGCCTC GATGTTGAGC TTCCGCCCAA CACTCCCGAA CATTGCCGTG TGAGTATACC ACAAGTCACC GCCAATGAGC TTGCTAACGC ACATAAAATA AAAAAAGTAT ATTGTGATTG ACTTTGAATA TGCTTCTCCC AACCCCCGTG GGTACGATAT CGCCAACCAT TTCCACGAAT GGCGAGCCAA TTACCACCAT CCAACTCATT CTCACTCCCT CATTCCTCAT TTCCCCTACC CCACACCTAT TCAGCGTGAA GACTTTTATC GATCATACTT GTCCGTCGAA GTTGACGGAA GAAACGGCGA AGAAGTGGTG GGCAAACGCA AGGATGTTCC AGCAGACAAG GTTGCTGCTC TTGAACGTGA AGTAAGGATT TGGAGCCCGG GGTGCAGTAT AAACTGGGCG TTGTGGGGTT TGGTTCAAGC TGAAGAACAG GTCTGTGCCT TGGCCACGAA GAAGGAAGGG TATGTCCCAG AATTCGATTA TCTCGTACGT GCCTCTTGTA TCTCTACACG TGTGAATGAA CACTTGTGCT GACCGCCGGT CACGGGGGTA ACAGTCGTAC GCCGCTGAGC GACTTGAAAT GTTTCGGGAC GAAGCCAAGA AGCTTGGAGT TCCGTTATAG ATTAACATAG ATTAGCCGAT TATA
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Protein sequence | MVVTPTRPPV EPSGPPLSPL ALASTAPRNS SDSYFAAQAG SRPLPRHRRT SGSSFSKLSE FSLDPPLLDK TDQYAASPDQ IDENGVTGVR HVALSVDASE WRQPVFKQKV LAILRRLHVP RWSSTLLTPT NIHLQKVSGA LTNAVFFVSF NPAPNPTSPS ESPLLTPTIP PSDPSHPPPL TPDQYPHTLL FRVYGPSSEA LISRSEELRI LHVLSTQYGI GPRVFGTFTN GRVEEFFPSR ALTAQELRDP SISRGIARRM RELHSVDLRR LGYEQGRATE PALWICLKEW SEAAEDVITS LTALGGTLEA WVERFSLHRI REEVTIYRNF VESQSGKGSG VVFAHNDTQY GNLLRLDVEL PPNTPEHCRY IVIDFEYASP NPRGYDIANH FHEWRANYHH PTHSHSLIPH FPYPTPIQRE DFYRSYLSVE VDGRNGEEVV GKRKDVPADK VAALEREVRI WSPGCSINWA LWGLVQAEEQ VCALATKKEG YVPEFDYLSY AAERLEMFRD EAKKLGVPL
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