Gene CNI01050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNI01050 
Symbol 
ID3259394 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006694 
Strand- 
Start bp259390 
End bp260068 
Gene Length679 bp 
Protein Length174 aa 
Translation table 
GC content49% 
IMG OID638258590 
Product30S ribosomal protein S18, putative 
Protein accessionXP_572840 
Protein GI58271368 
COG category 
COG ID 
TIGRFAM ID[TIGR00165] ribosomal protein S18 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0265013 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCTTTT CACGTCTTCC TCGACTTACA TCCGTCGTCC GCGCTCTTCA CACCTCTGCT 
TCCACCCGAC GACCCGCTGC CAACCCCACC GAGATTTTCC AAAAAGCCTT TGGCGAACGA 
GCTGCTACTC AAACTTCACC TCTGATGAAG AACGAGGTCC AGGACAACCG AGAACAGTTC 
AAAGCCAACC AAGTACGTTT TTTGCCCATC TCTCTTCTCC TCATTGTTTA TAGCTGGTGG 
AAGGTACACA TGGACATTAA AAAAGCTGAC CTGTTTTGGG TTTCTCAACT CTTCTAGTTT 
GCTGCCCCTC AAGCATTTAC CCAAGAATCC ATCTTCCCCA CTGCCCGACC TTTTCCCCGT 
CCACCTCTCC TCGGTCCTCC CAAGAAAATT GCCGTCAAGC TTGATCCGTT TTACATCACC 
AAGACTAATC CCTTGGTGCA CGATATGAAC CCTAATTTCG CCTATGAATT CGTCAACCCG 
ATGGGCAAGA TAAAAAGTCG GGCAGAGACT GGGTTGACTT GGAAGTCGCA AAGGCGGGTT 
GGTAAACTTG TGAGGAGGGC GAGGGCGATG GGGATTATCA GTCGATGGAC GAACAGGCCT 
GTACCAGGAG GTTTGGGATG GAGTTACTAG ATTTATTTAT TTATTTTCTG CGACGATGTA 
TCGTGATCTA GTCTGGTTT
 
Protein sequence
MSFSRLPRLT SVVRALHTSA STRRPAANPT EIFQKAFGER AATQTSPLMK NEVQDNREQF 
KANQFAAPQA FTQESIFPTA RPFPRPPLLG PPKKIAVKLD PFYITKTNPL VHDMNPNFAY 
EFVNPMGKIK SRAETGLTWK SQRRVGKLVR RARAMGIISR WTNRPVPGGL GWSY